Difference between revisions of "TSS:Mm 38141.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC021467:-6 BC066808:-10 BC067411:-10 AK159800:-10 AK167290:-16 AK029008:-28 AK148340:-28 NM_145554:-67 uc012dmx.1:-67 ENSMUST00000037828.7:-87 |chr=chr...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |ARH2= | ||
| + | |Arh= | ||
| + | |Arh1= | ||
| + | |FHCB1= | ||
| + | |FHCB2= | ||
|all_trans=BC021467:-6 BC066808:-10 BC067411:-10 AK159800:-10 AK167290:-16 AK029008:-28 AK148340:-28 NM_145554:-67 uc012dmx.1:-67 ENSMUST00000037828.7:-87 | |all_trans=BC021467:-6 BC066808:-10 BC067411:-10 AK159800:-10 AK167290:-16 AK029008:-28 AK148340:-28 NM_145554:-67 uc012dmx.1:-67 ENSMUST00000037828.7:-87 | ||
|chr=chr4 | |chr=chr4 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=73 | |distance_to_tss=73 | ||
|end=134767937 | |end=134767937 | ||
| + | |end_of_center_position=134767931 | ||
|entrez_id=100017 | |entrez_id=100017 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| − | |gene_alias=AA691260 | + | |gene_alias=AA691260 |
|gene_description=low density lipoprotein receptor adaptor protein 1 | |gene_description=low density lipoprotein receptor adaptor protein 1 | ||
|gene_id=100017 | |gene_id=100017 | ||
| Line 24: | Line 30: | ||
|species=mouse | |species=mouse | ||
|start=134767924 | |start=134767924 | ||
| + | |start_of_center_position=134767930 | ||
|strand=- | |strand=- | ||
|transcript_name=BC021467 | |transcript_name=BC021467 | ||
Revision as of 12:17, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 134767930 |
|---|---|
| End of the center position in the TSS region: | 134767931 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC021467 |
|---|---|
| Distance: | -6 |
| Num_trans: | 10 |
| All_trans: | BC021467:-6 BC066808:-10 BC067411:-10 AK159800:-10 AK167290:-16 AK029008:-28 AK148340:-28 NM_145554:-67 uc012dmx.1:-67 ENSMUST00000037828.7:-87 |
TATA-Box annotation
| Distance to TSS: | 73 |
|---|---|
| Nearest PromoterID: | NM_145554 |
| Entrez ID: | 100017 |
| Nearest Unigene: | Mm.27486 |
| Nearest Refseq: | NM_145554 |
| Nearest Ensembl: | ENSMUSG00000037295 |
| Gene Name: | low density lipoprotein receptor adaptor protein 1 |
| Gene Alias: | AA691260 |
| Gene Description: | low density lipoprotein receptor adaptor protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
