Difference between revisions of "TSS:Hg 102982.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=52 |entrez_id=6838 |gc_percent=0.691542 |gene_alias=RRP14 |gene_description=surfeit 6 |gene_name=SURF6 |gene_type=protein-coding...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC014878:0 EU831789:8 EU831867:8 BC003001:12 BC006197:12 KJ892233:16 AK054884:-39 NR_103874:-42 NM_006753:-42 NM_001278942:-42 ENST00000372022.5:-230 uc004cdb.6:-230 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=0 | ||
|distance_to_tss=52 | |distance_to_tss=52 | ||
| + | |end=133336168 | ||
|entrez_id=6838 | |entrez_id=6838 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
|gene_alias=RRP14 | |gene_alias=RRP14 | ||
|gene_description=surfeit 6 | |gene_description=surfeit 6 | ||
| − | |gene_name=SURF6 | + | |gene_id=6838 |
| + | |gene_name=surfeit 6 | ||
| + | |gene_source=HGNC:11478 | ||
| + | |gene_symbol=SURF6 | ||
| + | |gene_synonyms=FLJ30322 RRP14 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11478 | ||
|nearest_ensembl=ENSG00000148296 | |nearest_ensembl=ENSG00000148296 | ||
|nearest_promoter_id=NR_103874 | |nearest_promoter_id=NR_103874 | ||
|nearest_refseq=NM_006753 | |nearest_refseq=NM_006753 | ||
|nearest_unigene=Hs.274430 | |nearest_unigene=Hs.274430 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=133336148 | ||
| + | |strand=- | ||
| + | |transcript_name=BC014878 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102982.1 | |tss_id=hg_102982.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:49, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC014878 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | BC014878:0 EU831789:8 EU831867:8 BC003001:12 BC006197:12 KJ892233:16 AK054884:-39 NR_103874:-42 NM_006753:-42 NM_001278942:-42 ENST00000372022.5:-230 uc004cdb.6:-230 |
TATA-Box annotation
| Distance to TSS: | 52 |
|---|---|
| Nearest PromoterID: | NR_103874 |
| Entrez ID: | 6838 |
| Nearest Unigene: | Hs.274430 |
| Nearest Refseq: | NM_006753 |
| Nearest Ensembl: | ENSG00000148296 |
| Gene Name: | surfeit 6 |
| Gene Alias: | RRP14 |
| Gene Description: | surfeit 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
