Difference between revisions of "TSS:Hg 103016.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.09 |distance_to_tss=25 |entrez_id=11182 |gc_percent=0.746269 |gene_alias=GLUT6|GLUT9|HSA011372 |gene_description=solute carrier family 2 member 6 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GLUT9= | ||
| + | |HSA011372= | ||
| + | |all_trans=ENST00000371899.8:0 ENST00000432868.1:0 uc004cee.4:0 uc064wvu.1:0 AK074927:0 Y17803:11 NM_001145099:-12 NM_017585:-12 AK074836:12 AK096630:12 AK222919:17 ENST00000371897.8:20 ENST00000485978.1:20 uc004cef.4:20 uc064wvt.1:20 AJ011372:20 AK225106:20 BC013740:28 ENST00000414172.1:41 uc064wvv.1:41 AK294974:42 DQ891513:55 DQ894704:55 KJ898370:56 AB209108:248 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| + | |distance=0 | ||
|distance_to_tss=25 | |distance_to_tss=25 | ||
| + | |end=133479142 | ||
|entrez_id=11182 | |entrez_id=11182 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
|gene_alias=GLUT6|GLUT9|HSA011372 | |gene_alias=GLUT6|GLUT9|HSA011372 | ||
|gene_description=solute carrier family 2 member 6 | |gene_description=solute carrier family 2 member 6 | ||
| − | |gene_name=SLC2A6 | + | |gene_id=11182 |
| + | |gene_name=solute carrier family 2 member 6 | ||
| + | |gene_source=HGNC:11011 | ||
| + | |gene_symbol=SLC2A6 | ||
| + | |gene_synonyms=GLUT6 GLUT9 HSA011372 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11011 | ||
|nearest_ensembl=ENSG00000160326 | |nearest_ensembl=ENSG00000160326 | ||
|nearest_promoter_id=NM_017585 | |nearest_promoter_id=NM_017585 | ||
|nearest_refseq=NM_017585 | |nearest_refseq=NM_017585 | ||
|nearest_unigene=Hs.244378 | |nearest_unigene=Hs.244378 | ||
| + | |num_trans=25 | ||
| + | |species=human | ||
| + | |start=133479115 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000371899.8 ENST00000432868.1 uc004cee.4 uc064wvu.1 AK074927 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103016.1 | |tss_id=hg_103016.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=F2Z2F6 Q9UGQ3 | ||
}} | }} | ||
Revision as of 19:51, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000371899.8 ENST00000432868.1 uc004cee.4 uc064wvu.1 AK074927 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | ENST00000371899.8:0 ENST00000432868.1:0 uc004cee.4:0 uc064wvu.1:0 AK074927:0 Y17803:11 NM_001145099:-12 NM_017585:-12 AK074836:12 AK096630:12 AK222919:17 ENST00000371897.8:20 ENST00000485978.1:20 uc004cef.4:20 uc064wvt.1:20 AJ011372:20 AK225106:20 BC013740:28 ENST00000414172.1:41 uc064wvv.1:41 AK294974:42 DQ891513:55 DQ894704:55 KJ898370:56 AB209108:248 |
TATA-Box annotation
| Distance to TSS: | 25 |
|---|---|
| Nearest PromoterID: | NM_017585 |
| Entrez ID: | 11182 |
| Nearest Unigene: | Hs.244378 |
| Nearest Refseq: | NM_017585 |
| Nearest Ensembl: | ENSG00000160326 |
| Gene Name: | solute carrier family 2 member 6 |
| Gene Alias: | GLUT6 |
| Gene Description: | solute carrier family 2 member 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
