Difference between revisions of "TSS:Hg 103027.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=34775 |entrez_id=1757 |gc_percent=0.681592 |gene_alias=BPR-2|DMGDHL1|SAR|SARD|SDH |gene_description=sarcosine dehydrogenase |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |DMGDHL1= | ||
| + | |SAR= | ||
| + | |SARD= | ||
| + | |SDH= | ||
| + | |all_trans=ENST00000371868.5:-101 uc004cen.4:-101 AK093794:-101 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=-101 | ||
|distance_to_tss=34775 | |distance_to_tss=34775 | ||
| + | |end=133703600 | ||
|entrez_id=1757 | |entrez_id=1757 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
|gene_alias=BPR-2|DMGDHL1|SAR|SARD|SDH | |gene_alias=BPR-2|DMGDHL1|SAR|SARD|SDH | ||
|gene_description=sarcosine dehydrogenase | |gene_description=sarcosine dehydrogenase | ||
| − | |gene_name=SARDH | + | |gene_id=1757 |
| + | |gene_name=sarcosine dehydrogenase | ||
| + | |gene_source=HGNC:10536 | ||
| + | |gene_symbol=SARDH | ||
| + | |gene_synonyms=SDH | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10536 | ||
|nearest_ensembl=ENSG00000123453 | |nearest_ensembl=ENSG00000123453 | ||
|nearest_promoter_id=NM_001134707 | |nearest_promoter_id=NM_001134707 | ||
|nearest_refseq=NM_007101 | |nearest_refseq=NM_007101 | ||
|nearest_unigene=Hs.198003 | |nearest_unigene=Hs.198003 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=133703563 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000371868.5 uc004cen.4 AK093794 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103027.1 | |tss_id=hg_103027.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B3KSK4 Q5SYV2 | ||
}} | }} | ||
Revision as of 19:51, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000371868.5 uc004cen.4 AK093794 |
|---|---|
| Distance: | -101 |
| Num_trans: | 3 |
| All_trans: | ENST00000371868.5:-101 uc004cen.4:-101 AK093794:-101 |
TATA-Box annotation
| Distance to TSS: | 34775 |
|---|---|
| Nearest PromoterID: | NM_001134707 |
| Entrez ID: | 1757 |
| Nearest Unigene: | Hs.198003 |
| Nearest Refseq: | NM_007101 |
| Nearest Ensembl: | ENSG00000123453 |
| Gene Name: | sarcosine dehydrogenase |
| Gene Alias: | BPR-2 |
| Gene Description: | sarcosine dehydrogenase |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
