Difference between revisions of "TSS:Mm 4499.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000085876.10:-23 NM_001162938:-23 uc007drs.1:-23 uc007drt.1:-23 AK041099:-23 ENSMUST00000182880.1:-28 AK088880:-28 AK036671:201 |chr=chr1 |cpg_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |E430029J22Rik= | ||
| + | |Pydc3= | ||
| + | |Pyr-rv1= | ||
|all_trans=ENSMUST00000085876.10:-23 NM_001162938:-23 uc007drs.1:-23 uc007drt.1:-23 AK041099:-23 ENSMUST00000182880.1:-28 AK088880:-28 AK036671:201 | |all_trans=ENSMUST00000085876.10:-23 NM_001162938:-23 uc007drs.1:-23 uc007drt.1:-23 AK041099:-23 ENSMUST00000182880.1:-28 AK088880:-28 AK036671:201 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=26 | |distance_to_tss=26 | ||
|end=173673710 | |end=173673710 | ||
| + | |end_of_center_position=173673707 | ||
|entrez_id=100033459 | |entrez_id=100033459 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=9830148g24rik | + | |gene_alias=9830148g24rik |
|gene_description=interferon activated gene 208 | |gene_description=interferon activated gene 208 | ||
|gene_id=100033459 | |gene_id=100033459 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=173673702 | |start=173673702 | ||
| + | |start_of_center_position=173673706 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000085876.10 NM_001162938 uc007drs.1 uc007drt.1 AK041099 | |transcript_name=ENSMUST00000085876.10 NM_001162938 uc007drs.1 uc007drt.1 AK041099 | ||
Revision as of 05:42, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 173673706 |
|---|---|
| End of the center position in the TSS region: | 173673707 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000085876.10 NM_001162938 uc007drs.1 uc007drt.1 AK041099 |
|---|---|
| Distance: | -23 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000085876.10:-23 NM_001162938:-23 uc007drs.1:-23 uc007drt.1:-23 AK041099:-23 ENSMUST00000182880.1:-28 AK088880:-28 AK036671:201 |
TATA-Box annotation
| Distance to TSS: | 26 |
|---|---|
| Nearest PromoterID: | NM_001162938 |
| Entrez ID: | 100033459 |
| Nearest Unigene: | Mm.303377 |
| Nearest Refseq: | NM_001162938 |
| Nearest Ensembl: | ENSMUSG00000066677 |
| Gene Name: | pyrin domain containing 3 |
| Gene Alias: | 9830148g24rik |
| Gene Description: | interferon activated gene 208 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
