Difference between revisions of "TSS:Hg 10305.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=-137 |entrez_id=10459 |gc_percent=0.671642 |gene_alias=FANCV|MAD2B|POLZ2|REV7 |gene_description=MAD2 mitotic arrest deficient-l...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MAD2B= | ||
| + | |POLZ2= | ||
| + | |REV7= | ||
| + | |all_trans=ENST00000376692.8:125 NM_006341:125 uc001asp.4:125 AF157482:125 ENST00000456915.1:208 uc057cgu.1:208 AF139365:209 AK027327:212 ENST00000376669.9:221 uc057cgs.1:221 ENST00000445656.5:228 ENST00000376664.10:228 uc057cgt.1:228 uc057cgv.1:228 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=125 | ||
|distance_to_tss=-137 | |distance_to_tss=-137 | ||
| + | |end=11681364 | ||
|entrez_id=10459 | |entrez_id=10459 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
|gene_alias=FANCV|MAD2B|POLZ2|REV7 | |gene_alias=FANCV|MAD2B|POLZ2|REV7 | ||
|gene_description=MAD2 mitotic arrest deficient-like 2 (yeast) | |gene_description=MAD2 mitotic arrest deficient-like 2 (yeast) | ||
| − | |gene_name=MAD2L2 | + | |gene_id=10459 |
| + | |gene_name=MAD2 mitotic arrest deficient-like 2 (yeast) | ||
| + | |gene_source=HGNC:6764 | ||
| + | |gene_symbol=MAD2L2 | ||
| + | |gene_synonyms=MAD2B POLZ2 REV7 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:6764 | ||
|nearest_ensembl=ENSG00000116670 | |nearest_ensembl=ENSG00000116670 | ||
|nearest_promoter_id=NM_006341 | |nearest_promoter_id=NM_006341 | ||
|nearest_refseq=NM_006341 | |nearest_refseq=NM_006341 | ||
|nearest_unigene=Hs.19400 | |nearest_unigene=Hs.19400 | ||
| + | |num_trans=14 | ||
| + | |species=human | ||
| + | |start=11681338 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000376692.8 NM_006341 uc001asp.4 AF157482 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10305.1 | |tss_id=hg_10305.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R4I4 Q9UI95 | ||
}} | }} | ||
Revision as of 19:52, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000376692.8 NM_006341 uc001asp.4 AF157482 |
|---|---|
| Distance: | 125 |
| Num_trans: | 14 |
| All_trans: | ENST00000376692.8:125 NM_006341:125 uc001asp.4:125 AF157482:125 ENST00000456915.1:208 uc057cgu.1:208 AF139365:209 AK027327:212 ENST00000376669.9:221 uc057cgs.1:221 ENST00000445656.5:228 ENST00000376664.10:228 uc057cgt.1:228 uc057cgv.1:228 |
TATA-Box annotation
| Distance to TSS: | -137 |
|---|---|
| Nearest PromoterID: | NM_006341 |
| Entrez ID: | 10459 |
| Nearest Unigene: | Hs.19400 |
| Nearest Refseq: | NM_006341 |
| Nearest Ensembl: | ENSG00000116670 |
| Gene Name: | MAD2 mitotic arrest deficient-like 2 (yeast) |
| Gene Alias: | FANCV |
| Gene Description: | MAD2 mitotic arrest deficient-like 2 (yeast) |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
