Difference between revisions of "TSS:Hg 103050.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.16 |distance_to_tss=-3 |entrez_id=8019 |gc_percent=0.771144 |gene_alias=ORFX|RING3L |gene_description=bromodomain containing 3 |gene_name=BRD3 |gene...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |RING3L= | ||
| + | |all_trans=ENST00000303407.11:0 NM_007371:0 uc004cew.4:0 BC010699:24 D26362:43 BC032124:-479 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| + | |distance=0 | ||
|distance_to_tss=-3 | |distance_to_tss=-3 | ||
| + | |end=134068032 | ||
|entrez_id=8019 | |entrez_id=8019 | ||
|gc_percent=0.771144 | |gc_percent=0.771144 | ||
|gene_alias=ORFX|RING3L | |gene_alias=ORFX|RING3L | ||
|gene_description=bromodomain containing 3 | |gene_description=bromodomain containing 3 | ||
| − | |gene_name=BRD3 | + | |gene_id=8019 |
| + | |gene_name=bromodomain containing 3 | ||
| + | |gene_source=HGNC:1104 | ||
| + | |gene_symbol=BRD3 | ||
| + | |gene_synonyms=KIAA0043 ORFX RING3L | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1104 | ||
|nearest_ensembl=ENSG00000169925 | |nearest_ensembl=ENSG00000169925 | ||
|nearest_promoter_id=NM_007371 | |nearest_promoter_id=NM_007371 | ||
|nearest_refseq=NM_007371 | |nearest_refseq=NM_007371 | ||
|nearest_unigene=Hs.522472 | |nearest_unigene=Hs.522472 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=134068012 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000303407.11 NM_007371 uc004cew.4 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103050.1 | |tss_id=hg_103050.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R8H6 Q15059 | ||
}} | }} | ||
Revision as of 19:52, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000303407.11 NM_007371 uc004cew.4 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000303407.11:0 NM_007371:0 uc004cew.4:0 BC010699:24 D26362:43 BC032124:-479 |
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NM_007371 |
| Entrez ID: | 8019 |
| Nearest Unigene: | Hs.522472 |
| Nearest Refseq: | NM_007371 |
| Nearest Ensembl: | ENSG00000169925 |
| Gene Name: | bromodomain containing 3 |
| Gene Alias: | ORFX |
| Gene Description: | bromodomain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
