Difference between revisions of "TSS:Hg 103070.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-23821 |entrez_id=1289 |gc_percent=0.59204 |gene_alias=EDSC |gene_description=collagen type V alpha 1 chain |gene_name=COL5A1 |...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance= | ||
|distance_to_tss=-23821 | |distance_to_tss=-23821 | ||
| + | |end=134617985 | ||
|entrez_id=1289 | |entrez_id=1289 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| Line 12: | Line 15: | ||
|nearest_refseq=NM_000093 | |nearest_refseq=NM_000093 | ||
|nearest_unigene=Hs.210283 | |nearest_unigene=Hs.210283 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=134617983 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_103070.1 | |tss_id=hg_103070.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 19:53, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -23821 |
|---|---|
| Nearest PromoterID: | NM_001278074 |
| Entrez ID: | 1289 |
| Nearest Unigene: | Hs.210283 |
| Nearest Refseq: | NM_000093 |
| Nearest Ensembl: | ENSG00000130635 |
| Gene Name: | COL5A1 |
| Gene Alias: | EDSC |
| Gene Description: | collagen type V alpha 1 chain |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
