Difference between revisions of "TSS:Hg 103079.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=101 |entrez_id=2219 |gc_percent=0.572139 |gene_alias=FCNM |gene_description=ficolin 1 |gene_name=FCN1 |gene_type=protein-coding...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000616356.4:0 uc064wxu.1:0 CR749452:0 BC020635:0 AK314867:0 KJ896809:0 DQ891426:1 DQ894436:1 D83920:8 NM_002003:-28 ENST00000371806.3:-31 uc004cfi.4:-31 S80990:-31 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=0 | ||
|distance_to_tss=101 | |distance_to_tss=101 | ||
| + | |end=134917932 | ||
|entrez_id=2219 | |entrez_id=2219 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
|gene_alias=FCNM | |gene_alias=FCNM | ||
|gene_description=ficolin 1 | |gene_description=ficolin 1 | ||
| − | |gene_name=FCN1 | + | |gene_id=2219 |
| + | |gene_name=ficolin 1 | ||
| + | |gene_source=HGNC:3623 | ||
| + | |gene_symbol=FCN1 | ||
| + | |gene_synonyms=FCNM | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3623 | ||
|nearest_ensembl=ENSG00000085265 | |nearest_ensembl=ENSG00000085265 | ||
|nearest_promoter_id=NM_002003 | |nearest_promoter_id=NM_002003 | ||
|nearest_refseq=NM_002003 | |nearest_refseq=NM_002003 | ||
|nearest_unigene=Hs.440898 | |nearest_unigene=Hs.440898 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=134917872 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000616356.4 uc064wxu.1 CR749452 BC020635 AK314867 KJ896809 | ||
| + | |tss_classification=no | ||
|tss_id=hg_103079.1 | |tss_id=hg_103079.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A087WVE2 Q68DD1 | ||
}} | }} | ||
Revision as of 19:54, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000616356.4 uc064wxu.1 CR749452 BC020635 AK314867 KJ896809 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000616356.4:0 uc064wxu.1:0 CR749452:0 BC020635:0 AK314867:0 KJ896809:0 DQ891426:1 DQ894436:1 D83920:8 NM_002003:-28 ENST00000371806.3:-31 uc004cfi.4:-31 S80990:-31 |
TATA-Box annotation
| Distance to TSS: | 101 |
|---|---|
| Nearest PromoterID: | NM_002003 |
| Entrez ID: | 2219 |
| Nearest Unigene: | Hs.440898 |
| Nearest Refseq: | NM_002003 |
| Nearest Ensembl: | ENSG00000085265 |
| Gene Name: | ficolin 1 |
| Gene Alias: | FCNM |
| Gene Description: | ficolin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
