Difference between revisions of "TSS:Hg 103096.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.045 |distance_to_tss=1120 |entrez_id=51116 |gc_percent=0.641791 |gene_alias=CGI-91|MRP-S2|S2mt |gene_description=mitochondrial ribosomal protein S2...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MRP-S2= | ||
| + | |S2mt= | ||
| + | |all_trans=ENST00000371791.5:8 uc064wyq.1:8 BC021261:8 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| + | |distance=8 | ||
|distance_to_tss=1120 | |distance_to_tss=1120 | ||
| + | |end=135501760 | ||
|entrez_id=51116 | |entrez_id=51116 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
|gene_alias=CGI-91|MRP-S2|S2mt | |gene_alias=CGI-91|MRP-S2|S2mt | ||
|gene_description=mitochondrial ribosomal protein S2 | |gene_description=mitochondrial ribosomal protein S2 | ||
| − | |gene_name= | + | |gene_id=138162 |
| + | |gene_name=chromosome 9 open reading frame 116 | ||
| + | |gene_source=HGNC:28435 | ||
| + | |gene_symbol=C9orf116 | ||
| + | |gene_synonyms=MGC29761 PIERCE1 RbEST47 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:28435 | ||
|nearest_ensembl=ENSG00000122140 | |nearest_ensembl=ENSG00000122140 | ||
|nearest_promoter_id=NR_051968 | |nearest_promoter_id=NR_051968 | ||
|nearest_refseq=NM_016034 | |nearest_refseq=NM_016034 | ||
|nearest_unigene=Hs.382044 | |nearest_unigene=Hs.382044 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=135501741 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000371791.5 uc064wyq.1 BC021261 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103096.1 | |tss_id=hg_103096.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5BN46 | ||
}} | }} | ||
Revision as of 19:54, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000371791.5 uc064wyq.1 BC021261 |
|---|---|
| Distance: | 8 |
| Num_trans: | 3 |
| All_trans: | ENST00000371791.5:8 uc064wyq.1:8 BC021261:8 |
TATA-Box annotation
| Distance to TSS: | 1120 |
|---|---|
| Nearest PromoterID: | NR_051968 |
| Entrez ID: | 51116 |
| Nearest Unigene: | Hs.382044 |
| Nearest Refseq: | NM_016034 |
| Nearest Ensembl: | ENSG00000122140 |
| Gene Name: | chromosome 9 open reading frame 116 |
| Gene Alias: | CGI-91 |
| Gene Description: | mitochondrial ribosomal protein S2 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
