Difference between revisions of "TSS:Hg 103108.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=64749 |entrez_id=57582 |gc_percent=0.467662 |gene_alias=EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 |gene_description=potassium...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ENFL5= | ||
| + | |KCa4.1= | ||
| + | |SLACK= | ||
| + | |Slo2.2= | ||
| + | |bA100C15.2= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance= | ||
|distance_to_tss=64749 | |distance_to_tss=64749 | ||
| + | |end=135766938 | ||
|entrez_id=57582 | |entrez_id=57582 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| Line 12: | Line 20: | ||
|nearest_refseq=NM_020822 | |nearest_refseq=NM_020822 | ||
|nearest_unigene=Hs.104950 | |nearest_unigene=Hs.104950 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=135766929 | ||
| + | |strand=- | ||
|tata_box="-35(GTCTTTAAAAGG,-,0.00),-34(TCTTTAAAAGGA,+,0.00)" | |tata_box="-35(GTCTTTAAAAGG,-,0.00),-34(TCTTTAAAAGGA,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_103108.1 | |tss_id=hg_103108.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 19:55, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 64749 |
|---|---|
| Nearest PromoterID: | NM_001272003 |
| Entrez ID: | 57582 |
| Nearest Unigene: | Hs.104950 |
| Nearest Refseq: | NM_020822 |
| Nearest Ensembl: | ENSG00000107147 |
| Gene Name: | KCNT1 |
| Gene Alias: | EIEE14 |
| Gene Description: | potassium sodium-activated channel subfamily T member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(GTCTTTAAAAGG,-,0.00),-34(TCTTTAAAAGGA,+,0.00)" |
