Difference between revisions of "TSS:Hg 103115.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.14 |distance_to_tss=173 |entrez_id=10422 |gc_percent=0.791045 |gene_alias=GBDR1|KPC2|UBADC1 |gene_description=UBA domain containing 1 |gene_name=UBA...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |KPC2= | ||
| + | |UBADC1= | ||
| + | |all_trans=ENST00000478485.1:0 uc064xap.1:0 BC011822:0 DQ892567:9 KJ893030:9 DQ895782:9 CU678830:9 AF176796:-96 ENST00000371756.3:-136 NM_016172:-136 uc004cgt.3:-136 BC004967:-136 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| + | |distance=0 | ||
|distance_to_tss=173 | |distance_to_tss=173 | ||
| + | |end=135961244 | ||
|entrez_id=10422 | |entrez_id=10422 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
|gene_alias=GBDR1|KPC2|UBADC1 | |gene_alias=GBDR1|KPC2|UBADC1 | ||
|gene_description=UBA domain containing 1 | |gene_description=UBA domain containing 1 | ||
| − | |gene_name=UBAC1 | + | |gene_id=10422 |
| + | |gene_name=UBA domain containing 1 | ||
| + | |gene_source=HGNC:30221 | ||
| + | |gene_symbol=UBAC1 | ||
| + | |gene_synonyms=GBDR1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30221 | ||
|nearest_ensembl=ENSG00000130560 | |nearest_ensembl=ENSG00000130560 | ||
|nearest_promoter_id=NM_016172 | |nearest_promoter_id=NM_016172 | ||
|nearest_refseq=NM_016172 | |nearest_refseq=NM_016172 | ||
|nearest_unigene=Hs.9194 | |nearest_unigene=Hs.9194 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=135961170 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000478485.1 uc064xap.1 BC011822 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103115.1 | |tss_id=hg_103115.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:55, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000478485.1 uc064xap.1 BC011822 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENST00000478485.1:0 uc064xap.1:0 BC011822:0 DQ892567:9 KJ893030:9 DQ895782:9 CU678830:9 AF176796:-96 ENST00000371756.3:-136 NM_016172:-136 uc004cgt.3:-136 BC004967:-136 |
TATA-Box annotation
| Distance to TSS: | 173 |
|---|---|
| Nearest PromoterID: | NM_016172 |
| Entrez ID: | 10422 |
| Nearest Unigene: | Hs.9194 |
| Nearest Refseq: | NM_016172 |
| Nearest Ensembl: | ENSG00000130560 |
| Gene Name: | UBA domain containing 1 |
| Gene Alias: | GBDR1 |
| Gene Description: | UBA domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
