Difference between revisions of "TSS:Hg 103123.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.14 |distance_to_tss=-170 |entrez_id=90120 |gc_percent=0.810945 |gene_alias=- |gene_description=chromosome 9 open reading frame 69 |gene_name=C9orf69...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC111053:0 ENST00000557985.2:56 uc064xav.1:56 BC092490:56 ENST00000448040.2:152 uc064xax.1:152 ENST00000561457.2:159 NM_001256526:159 uc031tfs.1:159 BC014304:-169 BC013282:-211 AK023162:-226 AK091349:-231 ENST00000418388.5:-250 uc004cgx.6:-250 BC021231:-250 NR_134506:-270 NM_152833:-272 ENST00000447934.1:316 uc064xaw.1:316 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| + | |distance=0 | ||
|distance_to_tss=-170 | |distance_to_tss=-170 | ||
| + | |end=136118613 | ||
|entrez_id=90120 | |entrez_id=90120 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=chromosome 9 open reading frame 69 | |gene_description=chromosome 9 open reading frame 69 | ||
| − | |gene_name=C9orf69 | + | |gene_id=90120 |
| + | |gene_name=chromosome 9 open reading frame 69 | ||
| + | |gene_source=HGNC:31009 | ||
| + | |gene_symbol=C9orf69 | ||
| + | |gene_synonyms=bA83N9.1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31009 | ||
|nearest_ensembl=ENSG00000238227 | |nearest_ensembl=ENSG00000238227 | ||
|nearest_promoter_id=NM_001256526 | |nearest_promoter_id=NM_001256526 | ||
|nearest_refseq=NM_152833 | |nearest_refseq=NM_152833 | ||
|nearest_unigene=Hs.287411 | |nearest_unigene=Hs.287411 | ||
| + | |num_trans=20 | ||
| + | |species=human | ||
| + | |start=136118589 | ||
| + | |strand=- | ||
| + | |transcript_name=BC111053 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103123.1 | |tss_id=hg_103123.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:56, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC111053 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | BC111053:0 ENST00000557985.2:56 uc064xav.1:56 BC092490:56 ENST00000448040.2:152 uc064xax.1:152 ENST00000561457.2:159 NM_001256526:159 uc031tfs.1:159 BC014304:-169 BC013282:-211 AK023162:-226 AK091349:-231 ENST00000418388.5:-250 uc004cgx.6:-250 BC021231:-250 NR_134506:-270 NM_152833:-272 ENST00000447934.1:316 uc064xaw.1:316 |
TATA-Box annotation
| Distance to TSS: | -170 |
|---|---|
| Nearest PromoterID: | NM_001256526 |
| Entrez ID: | 90120 |
| Nearest Unigene: | Hs.287411 |
| Nearest Refseq: | NM_152833 |
| Nearest Ensembl: | ENSG00000238227 |
| Gene Name: | chromosome 9 open reading frame 69 |
| Gene Alias: | - |
| Gene Description: | chromosome 9 open reading frame 69 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
