Difference between revisions of "TSS:Hg 103197.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=954 |entrez_id=414332 |gc_percent=0.631841 |gene_alias=- |gene_description=lipocalin 10 |gene_name=LCN10 |gene_type=protein-codi...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000494294.5:0 ENST00000529013.1:0 uc064xdf.1:0 uc064xdk.1:0 BC036875:0 AK091788:0 BC064596:6 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| + | |distance=0 | ||
|distance_to_tss=954 | |distance_to_tss=954 | ||
| + | |end=136742029 | ||
|entrez_id=414332 | |entrez_id=414332 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=lipocalin 10 | |gene_description=lipocalin 10 | ||
| − | |gene_name=LCN10 | + | |gene_id=414332 |
| + | |gene_name=lipocalin 10 | ||
| + | |gene_source=HGNC:20892 | ||
| + | |gene_symbol=LCN10 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:20892 | ||
|nearest_ensembl=ENSG00000187922 | |nearest_ensembl=ENSG00000187922 | ||
|nearest_promoter_id=NM_001001712 | |nearest_promoter_id=NM_001001712 | ||
|nearest_refseq=NM_001001712 | |nearest_refseq=NM_001001712 | ||
|nearest_unigene=Hs.98132 | |nearest_unigene=Hs.98132 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=136741981 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000494294.5 ENST00000529013.1 uc064xdf.1 uc064xdk.1 BC036875 AK091788 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103197.1 | |tss_id=hg_103197.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=H0YCM3 | ||
}} | }} | ||
Revision as of 19:59, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000494294.5 ENST00000529013.1 uc064xdf.1 uc064xdk.1 BC036875 AK091788 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000494294.5:0 ENST00000529013.1:0 uc064xdf.1:0 uc064xdk.1:0 BC036875:0 AK091788:0 BC064596:6 |
TATA-Box annotation
| Distance to TSS: | 954 |
|---|---|
| Nearest PromoterID: | NM_001001712 |
| Entrez ID: | 414332 |
| Nearest Unigene: | Hs.98132 |
| Nearest Refseq: | NM_001001712 |
| Nearest Ensembl: | ENSG00000187922 |
| Gene Name: | lipocalin 10 |
| Gene Alias: | - |
| Gene Description: | lipocalin 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
