Difference between revisions of "TSS:Mm 62281.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000183019.1:-17 AK141001:-17 ENSMUST00000182342.1:121 |chr=chr7 |cpg_percent=0.115 |distance=-17 |distance_to_tss=1118 |end=99626018 |entrez_id...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Gm4980= | ||
|all_trans=ENSMUST00000183019.1:-17 AK141001:-17 ENSMUST00000182342.1:121 | |all_trans=ENSMUST00000183019.1:-17 AK141001:-17 ENSMUST00000182342.1:121 | ||
|chr=chr7 | |chr=chr7 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=1118 | |distance_to_tss=1118 | ||
|end=99626018 | |end=99626018 | ||
| + | |end_of_center_position=99625986 | ||
|entrez_id=100503386 | |entrez_id=100503386 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=EG245190 | + | |gene_alias=EG245190 |
|gene_description=trophoblast glycoprotein-like | |gene_description=trophoblast glycoprotein-like | ||
|gene_id=100038557 | |gene_id=100038557 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=99625952 | |start=99625952 | ||
| + | |start_of_center_position=99625985 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000183019.1 AK141001 | |transcript_name=ENSMUST00000183019.1 AK141001 | ||
Revision as of 04:50, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 99625985 |
|---|---|
| End of the center position in the TSS region: | 99625986 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000183019.1 AK141001 |
|---|---|
| Distance: | -17 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000183019.1:-17 AK141001:-17 ENSMUST00000182342.1:121 |
TATA-Box annotation
| Distance to TSS: | 1118 |
|---|---|
| Nearest PromoterID: | NM_001195529 |
| Entrez ID: | 100503386 |
| Nearest Unigene: | Mm.180719 |
| Nearest Refseq: | NM_001195529 |
| Nearest Ensembl: | ENSMUSG00000096606 |
| Gene Name: | predicted gene 10605 |
| Gene Alias: | EG245190 |
| Gene Description: | trophoblast glycoprotein-like |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
