Difference between revisions of "TSS:Hg 103276.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=-6999 |entrez_id=401563 |gc_percent=0.691542 |gene_alias=- |gene_description=chromosome 9 open reading frame 139 |gene_name=C9o...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000470535.2:-334 uc064xhu.1:-334 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=-334 | ||
|distance_to_tss=-6999 | |distance_to_tss=-6999 | ||
| + | |end=137020471 | ||
|entrez_id=401563 | |entrez_id=401563 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=chromosome 9 open reading frame 139 | |gene_description=chromosome 9 open reading frame 139 | ||
| − | |gene_name= | + | |gene_id=20 |
| + | |gene_name=ATP binding cassette subfamily A member 2 | ||
| + | |gene_source=HGNC:32 | ||
| + | |gene_symbol=ABCA2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:32 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NM_207511 | |nearest_promoter_id=NM_207511 | ||
|nearest_refseq=NM_207511 | |nearest_refseq=NM_207511 | ||
|nearest_unigene=Hs.522509 | |nearest_unigene=Hs.522509 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=137020459 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000470535.2 uc064xhu.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103276.1 | |tss_id=hg_103276.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=H7C5M6 | ||
}} | }} | ||
Revision as of 20:02, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000470535.2 uc064xhu.1 |
|---|---|
| Distance: | -334 |
| Num_trans: | 2 |
| All_trans: | ENST00000470535.2:-334 uc064xhu.1:-334 |
TATA-Box annotation
| Distance to TSS: | -6999 |
|---|---|
| Nearest PromoterID: | NM_207511 |
| Entrez ID: | 401563 |
| Nearest Unigene: | Hs.522509 |
| Nearest Refseq: | NM_207511 |
| Nearest Ensembl: | |
| Gene Name: | ATP binding cassette subfamily A member 2 |
| Gene Alias: | - |
| Gene Description: | chromosome 9 open reading frame 139 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
