Difference between revisions of "TSS:Hg 103298.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=29 |entrez_id=56654 |gc_percent=0.721393 |gene_alias=CAB|CAB-|CAB-1|CAB1|NPDC-1 |gene_description="neural proliferation, differen...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |CAB-= | ||
| + | |CAB-1= | ||
| + | |CAB1= | ||
| + | |NPDC-1= | ||
| + | |all_trans=ENST00000371601.4:0 ENST00000485589.1:0 NM_015392:0 uc004ckt.3:0 uc064xii.1:0 AK074793:0 AF285836:0 AF327349:1 BC004217:49 AF272357:86 ENST00000488145.1:101 uc064xih.1:101 AK225091:130 KJ894338:168 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| + | |distance=0 | ||
|distance_to_tss=29 | |distance_to_tss=29 | ||
| + | |end=137046234 | ||
|entrez_id=56654 | |entrez_id=56654 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
|gene_alias=CAB|CAB-|CAB-1|CAB1|NPDC-1 | |gene_alias=CAB|CAB-|CAB-1|CAB1|NPDC-1 | ||
|gene_description="neural proliferation, differentiation and control 1" | |gene_description="neural proliferation, differentiation and control 1" | ||
| − | |gene_name=NPDC1 | + | |gene_id=56654 |
| + | |gene_name="neural proliferation, differentiation and control, 1" | ||
| + | |gene_source=HGNC:7899 | ||
| + | |gene_symbol=NPDC1 | ||
| + | |gene_synonyms=CAB- CAB1 DKFZp586J0523 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7899 | ||
|nearest_ensembl=ENSG00000107281 | |nearest_ensembl=ENSG00000107281 | ||
|nearest_promoter_id=NM_015392 | |nearest_promoter_id=NM_015392 | ||
|nearest_refseq=NM_015392 | |nearest_refseq=NM_015392 | ||
|nearest_unigene=Hs.719906 | |nearest_unigene=Hs.719906 | ||
| + | |num_trans=14 | ||
| + | |species=human | ||
| + | |start=137046156 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000371601.4 ENST00000485589.1 NM_015392 uc004ckt.3 uc064xii.1 AK074793 AF285836 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103298.1 | |tss_id=hg_103298.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8NCE1 Q9NQX5 | ||
}} | }} | ||
Revision as of 20:03, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371601.4 ENST00000485589.1 NM_015392 uc004ckt.3 uc064xii.1 AK074793 AF285836 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000371601.4:0 ENST00000485589.1:0 NM_015392:0 uc004ckt.3:0 uc064xii.1:0 AK074793:0 AF285836:0 AF327349:1 BC004217:49 AF272357:86 ENST00000488145.1:101 uc064xih.1:101 AK225091:130 KJ894338:168 |
TATA-Box annotation
| Distance to TSS: | 29 |
|---|---|
| Nearest PromoterID: | NM_015392 |
| Entrez ID: | 56654 |
| Nearest Unigene: | Hs.719906 |
| Nearest Refseq: | NM_015392 |
| Nearest Ensembl: | ENSG00000107281 |
| Gene Name: | "neural proliferation, differentiation and control, 1" |
| Gene Alias: | CAB |
| Gene Description: | "neural proliferation, differentiation and control 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
