Difference between revisions of "TSS:Hg 103320.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=-380 |entrez_id=100500811 |gc_percent=0.741294 |gene_alias=- |gene_description=microRNA 3621 |gene_name=MIR3621 |gene_type=ncRNA...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=EU588721:211 DQ355157:-315 BC140911:-348 LG052440:371 NM_001013653:-379 ENST00000371542.3:-391 uc004clp.4:-391 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=211 | ||
|distance_to_tss=-380 | |distance_to_tss=-380 | ||
| + | |end=137169660 | ||
|entrez_id=100500811 | |entrez_id=100500811 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=microRNA 3621 | |gene_description=microRNA 3621 | ||
| − | |gene_name= | + | |gene_id=389816 |
| + | |gene_name=leucine rich repeat containing 26 | ||
| + | |gene_source=HGNC:31409 | ||
| + | |gene_symbol=LRRC26 | ||
| + | |gene_synonyms=OTTHUMG00000020980 bA350O14.10 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:31409 | ||
|nearest_ensembl=ENSG00000263697 | |nearest_ensembl=ENSG00000263697 | ||
|nearest_promoter_id=NR_037416 | |nearest_promoter_id=NR_037416 | ||
|nearest_refseq=NR_037416 | |nearest_refseq=NR_037416 | ||
|nearest_unigene= | |nearest_unigene= | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=137169640 | ||
| + | |strand=- | ||
| + | |transcript_name=EU588721 | ||
| + | |tss_classification=no | ||
|tss_id=hg_103320.1 | |tss_id=hg_103320.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:04, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | EU588721 |
|---|---|
| Distance: | 211 |
| Num_trans: | 7 |
| All_trans: | EU588721:211 DQ355157:-315 BC140911:-348 LG052440:371 NM_001013653:-379 ENST00000371542.3:-391 uc004clp.4:-391 |
TATA-Box annotation
| Distance to TSS: | -380 |
|---|---|
| Nearest PromoterID: | NR_037416 |
| Entrez ID: | 100500811 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_037416 |
| Nearest Ensembl: | ENSG00000263697 |
| Gene Name: | leucine rich repeat containing 26 |
| Gene Alias: | - |
| Gene Description: | microRNA 3621 |
| Gene Type: | ncRNA |
| CpG%: | 0.12 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
