Difference between revisions of "TSS:Mm 76557.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AF084259:-31 AK142758:-53 NM_012047:-69 uc009mrn.2:-69 ENSMUST00000034085.7:-72 AK138934:-72 ENSMUST00000135471.1:95 AK160638:151 BC166008:154 |chr=chr8...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CELTIX1= | ||
| + | |Ptpn13ip= | ||
|all_trans=AF084259:-31 AK142758:-53 NM_012047:-69 uc009mrn.2:-69 ENSMUST00000034085.7:-72 AK138934:-72 ENSMUST00000135471.1:95 AK160638:151 BC166008:154 | |all_trans=AF084259:-31 AK142758:-53 NM_012047:-69 uc009mrn.2:-69 ENSMUST00000034085.7:-72 AK138934:-72 ENSMUST00000135471.1:95 AK160638:151 BC166008:154 | ||
|chr=chr8 | |chr=chr8 | ||
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|distance_to_tss=76 | |distance_to_tss=76 | ||
|end=88362122 | |end=88362122 | ||
| + | |end_of_center_position=88362116 | ||
|entrez_id=26992 | |entrez_id=26992 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=BP75 | + | |gene_alias=BP75 |
|gene_description=bromodomain containing 7 | |gene_description=bromodomain containing 7 | ||
|gene_id=26992 | |gene_id=26992 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=88362108 | |start=88362108 | ||
| + | |start_of_center_position=88362115 | ||
|strand=- | |strand=- | ||
|transcript_name=AF084259 | |transcript_name=AF084259 | ||
Revision as of 16:59, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 88362115 |
|---|---|
| End of the center position in the TSS region: | 88362116 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF084259 |
|---|---|
| Distance: | -31 |
| Num_trans: | 9 |
| All_trans: | AF084259:-31 AK142758:-53 NM_012047:-69 uc009mrn.2:-69 ENSMUST00000034085.7:-72 AK138934:-72 ENSMUST00000135471.1:95 AK160638:151 BC166008:154 |
TATA-Box annotation
| Distance to TSS: | 76 |
|---|---|
| Nearest PromoterID: | NM_012047 |
| Entrez ID: | 26992 |
| Nearest Unigene: | Mm.5400 |
| Nearest Refseq: | NM_012047 |
| Nearest Ensembl: | ENSMUSG00000031660 |
| Gene Name: | bromodomain containing 7 |
| Gene Alias: | BP75 |
| Gene Description: | bromodomain containing 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
