Difference between revisions of "TSS:Hg 103356.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.14 |distance_to_tss=702 |entrez_id=441478 |gc_percent=0.726368 |gene_alias=- |gene_description=NOTCH-regulated ankyrin repeat protein |gene_name=NRA...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HQ448596:-352 KJ896285:-352 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| + | |distance=-352 | ||
|distance_to_tss=702 | |distance_to_tss=702 | ||
| + | |end=137301578 | ||
|entrez_id=441478 | |entrez_id=441478 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=NOTCH-regulated ankyrin repeat protein | |gene_description=NOTCH-regulated ankyrin repeat protein | ||
| − | |gene_name=NRARP | + | |gene_id=441478 |
| + | |gene_name=NOTCH-regulated ankyrin repeat protein | ||
| + | |gene_source=HGNC:33843 | ||
| + | |gene_symbol=NRARP | ||
| + | |gene_synonyms=MGC61598 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:33843 | ||
|nearest_ensembl=ENSG00000198435 | |nearest_ensembl=ENSG00000198435 | ||
|nearest_promoter_id=NM_001004354 | |nearest_promoter_id=NM_001004354 | ||
|nearest_refseq=NM_001004354 | |nearest_refseq=NM_001004354 | ||
|nearest_unigene=Hs.535075 | |nearest_unigene=Hs.535075 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=137301520 | ||
| + | |strand=- | ||
| + | |transcript_name=HQ448596 KJ896285 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103356.1 | |tss_id=hg_103356.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:05, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | HQ448596 KJ896285 |
|---|---|
| Distance: | -352 |
| Num_trans: | 2 |
| All_trans: | HQ448596:-352 KJ896285:-352 |
TATA-Box annotation
| Distance to TSS: | 702 |
|---|---|
| Nearest PromoterID: | NM_001004354 |
| Entrez ID: | 441478 |
| Nearest Unigene: | Hs.535075 |
| Nearest Refseq: | NM_001004354 |
| Nearest Ensembl: | ENSG00000198435 |
| Gene Name: | NOTCH-regulated ankyrin repeat protein |
| Gene Alias: | - |
| Gene Description: | NOTCH-regulated ankyrin repeat protein |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
