Difference between revisions of "TSS:Hg 103363.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=80 |entrez_id=54932 |gc_percent=0.800995 |gene_alias=mut-7 |gene_description=exonuclease 3'-5' domain containing 3 |gene_name=E...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000479452.5:0 ENST00000460390.6:0 ENST00000475006.1:0 ENST00000465160.2:0 uc004cms.4:0 uc064xlh.1:0 uc064xli.1:0 uc064xlj.1:0 AK094438:0 BC037355:0 BC033079:0 BC069205:0 BC039252:0 AK000440:0 BC110879:5 BC065002:22 ENST00000340951.8:-51 NM_017820:-51 NM_001286823:-51 NR_104598:-51 NR_104599:-51 uc004cmp.4:-51 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| + | |distance=0 | ||
|distance_to_tss=80 | |distance_to_tss=80 | ||
| + | |end=137423211 | ||
|entrez_id=54932 | |entrez_id=54932 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
|gene_alias=mut-7 | |gene_alias=mut-7 | ||
|gene_description=exonuclease 3'-5' domain containing 3 | |gene_description=exonuclease 3'-5' domain containing 3 | ||
| − | |gene_name=EXD3 | + | |gene_id=54932 |
| + | |gene_name=exonuclease 3'-5' domain containing 3 | ||
| + | |gene_source=HGNC:26023 | ||
| + | |gene_symbol=EXD3 | ||
| + | |gene_synonyms=FLJ20433 LOC54932 mut-7 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26023 | ||
|nearest_ensembl=ENSG00000187609 | |nearest_ensembl=ENSG00000187609 | ||
|nearest_promoter_id=NR_104599 | |nearest_promoter_id=NR_104599 | ||
|nearest_refseq=NM_017820 | |nearest_refseq=NM_017820 | ||
|nearest_unigene=Hs.495553 | |nearest_unigene=Hs.495553 | ||
| + | |num_trans=22 | ||
| + | |species=human | ||
| + | |start=137423153 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000479452.5 ENST00000460390.6 ENST00000475006.1 ENST00000465160.2 uc004cms.4 uc064xlh.1 uc064xli.1 uc064xlj.1 AK094438 BC037355 BC033079 BC069205 BC039252 AK000440 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103363.1 | |tss_id=hg_103363.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=E9PI94 E9PN82 Q8N9H8 | ||
}} | }} | ||
Revision as of 20:06, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000479452.5 ENST00000460390.6 ENST00000475006.1 ENST00000465160.2 uc004cms.4 uc064xlh.1 uc064xli.1 uc064xlj.1 AK094438 BC037355 BC033079 BC069205 BC039252 AK000440 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENST00000479452.5:0 ENST00000460390.6:0 ENST00000475006.1:0 ENST00000465160.2:0 uc004cms.4:0 uc064xlh.1:0 uc064xli.1:0 uc064xlj.1:0 AK094438:0 BC037355:0 BC033079:0 BC069205:0 BC039252:0 AK000440:0 BC110879:5 BC065002:22 ENST00000340951.8:-51 NM_017820:-51 NM_001286823:-51 NR_104598:-51 NR_104599:-51 uc004cmp.4:-51 |
TATA-Box annotation
| Distance to TSS: | 80 |
|---|---|
| Nearest PromoterID: | NR_104599 |
| Entrez ID: | 54932 |
| Nearest Unigene: | Hs.495553 |
| Nearest Refseq: | NM_017820 |
| Nearest Ensembl: | ENSG00000187609 |
| Gene Name: | exonuclease 3'-5' domain containing 3 |
| Gene Alias: | mut-7 |
| Gene Description: | exonuclease 3'-5' domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
