Difference between revisions of "TSS:Mm 79221.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC049643:0 ENSMUST00000068730.3:4 AK017085:4 NR_029465:-25 uc012gsx.2:-25 uc009pjj.1:-25 AK015955:-25 |chr=chr9 |cpg_percent=0.025 |distance=0 |distance...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ENSMUSG00000079564= | ||
|all_trans=BC049643:0 ENSMUST00000068730.3:4 AK017085:4 NR_029465:-25 uc012gsx.2:-25 uc009pjj.1:-25 AK015955:-25 | |all_trans=BC049643:0 ENSMUST00000068730.3:4 AK017085:4 NR_029465:-25 uc012gsx.2:-25 uc009pjj.1:-25 AK015955:-25 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=34 | |distance_to_tss=34 | ||
|end=49518332 | |end=49518332 | ||
| + | |end_of_center_position=49518323 | ||
|entrez_id=100036537 | |entrez_id=100036537 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias=ENSMUSG00000060603 | + | |gene_alias=ENSMUSG00000060603 |
|gene_description=predicted gene 11149 | |gene_description=predicted gene 11149 | ||
|gene_id=100036537 | |gene_id=100036537 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=49518312 | |start=49518312 | ||
| + | |start_of_center_position=49518322 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC049643 | |transcript_name=BC049643 | ||
Revision as of 00:19, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 49518322 |
|---|---|
| End of the center position in the TSS region: | 49518323 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC049643 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | BC049643:0 ENSMUST00000068730.3:4 AK017085:4 NR_029465:-25 uc012gsx.2:-25 uc009pjj.1:-25 AK015955:-25 |
TATA-Box annotation
| Distance to TSS: | 34 |
|---|---|
| Nearest PromoterID: | NR_029465 |
| Entrez ID: | 100036537 |
| Nearest Unigene: | Mm.437541 |
| Nearest Refseq: | NR_029465 |
| Nearest Ensembl: | ENSMUSG00000079564 |
| Gene Name: | predicted gene 11149 |
| Gene Alias: | ENSMUSG00000060603 |
| Gene Description: | predicted gene 11149 |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
