Difference between revisions of "TSS:Hg 100151.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=-162 |entrez_id=54801 |gc_percent=0.547264 |gene_alias=Dgt6|FAM29A |gene_description=HAUS augmin like complex subunit 6 |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |FAM29A= | ||
| + | |all_trans=ENST00000380502.7:0 uc003znk.5:0 AF533709:0 NM_001270890:147 NM_017645:147 AF537091:185 AK056458:185 AL832495:188 BC026178:188 BC113981:350 BC114492:350 AB527315:438 AM393468:438 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| + | |distance=0 | ||
|distance_to_tss=-162 | |distance_to_tss=-162 | ||
| + | |end=19103120 | ||
|entrez_id=54801 | |entrez_id=54801 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
|gene_alias=Dgt6|FAM29A | |gene_alias=Dgt6|FAM29A | ||
|gene_description=HAUS augmin like complex subunit 6 | |gene_description=HAUS augmin like complex subunit 6 | ||
| − | |gene_name=HAUS6 | + | |gene_id=54801 |
| + | |gene_name=HAUS augmin like complex subunit 6 | ||
| + | |gene_source=HGNC:25948 | ||
| + | |gene_symbol=HAUS6 | ||
| + | |gene_synonyms=FLJ20060 KIAA1574 dgt6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25948 | ||
|nearest_ensembl=ENSG00000147874 | |nearest_ensembl=ENSG00000147874 | ||
|nearest_promoter_id=NM_001270890 | |nearest_promoter_id=NM_001270890 | ||
|nearest_refseq=NM_017645 | |nearest_refseq=NM_017645 | ||
|nearest_unigene=Hs.533468 | |nearest_unigene=Hs.533468 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=19103088 | ||
| + | |strand=- | ||
|tata_box="-84(CCATTTATGGCT,+,0.00)" | |tata_box="-84(CCATTTATGGCT,+,0.00)" | ||
| + | |transcript_name=ENST00000380502.7 uc003znk.5 AF533709 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100151.1 | |tss_id=hg_100151.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q7Z4H7 | ||
}} | }} | ||
Revision as of 17:02, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000380502.7 uc003znk.5 AF533709 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000380502.7:0 uc003znk.5:0 AF533709:0 NM_001270890:147 NM_017645:147 AF537091:185 AK056458:185 AL832495:188 BC026178:188 BC113981:350 BC114492:350 AB527315:438 AM393468:438 |
TATA-Box annotation
| Distance to TSS: | -162 |
|---|---|
| Nearest PromoterID: | NM_001270890 |
| Entrez ID: | 54801 |
| Nearest Unigene: | Hs.533468 |
| Nearest Refseq: | NM_017645 |
| Nearest Ensembl: | ENSG00000147874 |
| Gene Name: | HAUS augmin like complex subunit 6 |
| Gene Alias: | Dgt6 |
| Gene Description: | HAUS augmin like complex subunit 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-84(CCATTTATGGCT,+,0.00)" |
