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Difference between revisions of "TSS:Mm 99280.1"

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(Created page with "{{TSSDetail |all_trans=BC006866:-14 NM_026562:15 uc007loi.1:15 AK007245:15 ENSMUST00000103107.4:-62 AK049116:-62 ENSMUST00000128735.1:-146 uc007loh.1:-146 AK006754:-146 |chr=c...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|4921513J16Rik=
 +
|5430417M23Rik=
 +
|Cntd=
 
|all_trans=BC006866:-14 NM_026562:15 uc007loi.1:15 AK007245:15 ENSMUST00000103107.4:-62 AK049116:-62 ENSMUST00000128735.1:-146 uc007loh.1:-146 AK006754:-146
 
|all_trans=BC006866:-14 NM_026562:15 uc007loi.1:15 AK007245:15 ENSMUST00000103107.4:-62 AK049116:-62 ENSMUST00000128735.1:-146 uc007loh.1:-146 AK006754:-146
 
|chr=chr11
 
|chr=chr11
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|distance_to_tss=-30
 
|distance_to_tss=-30
 
|end=101279188
 
|end=101279188
 +
|end_of_center_position=101279173
 
|entrez_id=68107
 
|entrez_id=68107
 
|gc_percent=0.477612
 
|gc_percent=0.477612
|gene_alias=1700051C09Rik|4921513J16Rik|5430417M23Rik|Cntd
+
|gene_alias=1700051C09Rik
 
|gene_description=cyclin N-terminal domain containing 1
 
|gene_description=cyclin N-terminal domain containing 1
 
|gene_id=68107
 
|gene_id=68107
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|species=mouse
 
|species=mouse
 
|start=101279157
 
|start=101279157
 +
|start_of_center_position=101279172
 
|strand=+
 
|strand=+
 
|transcript_name=BC006866
 
|transcript_name=BC006866

Revision as of 09:52, 12 May 2019

Basic information about the TSS


TSS ID:mm_99280.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:101279157
End:101279188
Strand:+
TSS Score:1
Start of the center position in the TSS region:101279172
End of the center position in the TSS region:101279173



Gene and protein annotation


Transcript_name:BC006866
Distance:-14
GeneID:68107
HGNC/MGI_ID:MGI:1923965
UniProt_ID:
Gene_name:cyclin N-terminal domain containing 1
Gene_symbol:Cntd1
Gene_synonyms:1700051C09Rik 5430417M23Rik
Gene_source:MGI:1923965



Transcript annotation


Transcript_name:BC006866
Distance:-14
Num_trans:9
All_trans:BC006866:-14 NM_026562:15 uc007loi.1:15 AK007245:15 ENSMUST00000103107.4:-62 AK049116:-62 ENSMUST00000128735.1:-146 uc007loh.1:-146 AK006754:-146



TATA-Box annotation


Distance to TSS:-30
Nearest PromoterID:NM_026562
Entrez ID:68107
Nearest Unigene:Mm.262369
Nearest Refseq:NM_026562
Nearest Ensembl:ENSMUSG00000078653
Gene Name:cyclin N-terminal domain containing 1
Gene Alias:1700051C09Rik
Gene Description:cyclin N-terminal domain containing 1
Gene Type:protein-coding
CpG%:0.04
GC%:0.477612
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):