Difference between revisions of "TSS:Mm 99545.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000124462.2:-13 NR_045346:-13 uc029rok.1:-13 AK157183:-13 |chr=chr11 |cpg_percent=0.015 |distance=-13 |distance_to_tss=36 |end=103344812 |entre...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Gm11648= | ||
| + | |OTTMUSG00000003073= | ||
|all_trans=ENSMUST00000124462.2:-13 NR_045346:-13 uc029rok.1:-13 AK157183:-13 | |all_trans=ENSMUST00000124462.2:-13 NR_045346:-13 uc029rok.1:-13 AK157183:-13 | ||
|chr=chr11 | |chr=chr11 | ||
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|distance_to_tss=36 | |distance_to_tss=36 | ||
|end=103344812 | |end=103344812 | ||
| + | |end_of_center_position=103344789 | ||
|entrez_id=653030 | |entrez_id=653030 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=F830206d12rik | + | |gene_alias=F830206d12rik |
|gene_description="Rho GTPase activating protein 27, opposite strand 3" | |gene_description="Rho GTPase activating protein 27, opposite strand 3" | ||
|gene_id=653030 | |gene_id=653030 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=103344765 | |start=103344765 | ||
| + | |start_of_center_position=103344788 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000124462.2 NR_045346 uc029rok.1 AK157183 | |transcript_name=ENSMUST00000124462.2 NR_045346 uc029rok.1 AK157183 | ||
Revision as of 10:32, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 103344788 |
|---|---|
| End of the center position in the TSS region: | 103344789 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000124462.2 NR_045346 uc029rok.1 AK157183 |
|---|---|
| Distance: | -13 |
| Num_trans: | 4 |
| All_trans: | ENSMUST00000124462.2:-13 NR_045346:-13 uc029rok.1:-13 AK157183:-13 |
TATA-Box annotation
| Distance to TSS: | 36 |
|---|---|
| Nearest PromoterID: | NR_045346 |
| Entrez ID: | 653030 |
| Nearest Unigene: | Mm.440684 |
| Nearest Refseq: | NR_045346 |
| Nearest Ensembl: | ENSMUSG00000085887 |
| Gene Name: | "Rho GTPase activating protein 27, opposite strand 3" |
| Gene Alias: | F830206d12rik |
| Gene Description: | "Rho GTPase activating protein 27, opposite strand 3" |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
