Personal tools

Difference between revisions of "TSS:Mm 9965.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |all_trans=D50524:-325 CT010291:-325 |chr=chr1 |cpg_percent=0.015 |distance=-325 |distance_to_tss=6194 |end=191177145 |entrez_id=11910 |gc_percent=0.447761 |gene_a...")
 
Line 6: Line 6:
 
|distance_to_tss=6194
 
|distance_to_tss=6194
 
|end=191177145
 
|end=191177145
 +
|end_of_center_position=191177140
 
|entrez_id=11910
 
|entrez_id=11910
 
|gc_percent=0.447761
 
|gc_percent=0.447761
Line 24: Line 25:
 
|species=mouse
 
|species=mouse
 
|start=191177133
 
|start=191177133
 +
|start_of_center_position=191177139
 
|strand=-
 
|strand=-
 
|transcript_name=D50524 CT010291
 
|transcript_name=D50524 CT010291

Revision as of 07:17, 11 May 2019

Basic information about the TSS


TSS ID:mm_9965.1
Species:mouse
Chr:chr1
TSS Classification:no
Start:191177133
End:191177145
Strand:-
TSS Score:1
Start of the center position in the TSS region:191177139
End of the center position in the TSS region:191177140



Gene and protein annotation


Transcript_name:D50524 CT010291
Distance:-325
GeneID:11910
HGNC/MGI_ID:MGI:109384
UniProt_ID:Q62281
Gene_name:activating transcription factor 3
Gene_symbol:Atf3
Gene_synonyms:LRG-21
Gene_source:MGI:109384



Transcript annotation


Transcript_name:D50524 CT010291
Distance:-325
Num_trans:2
All_trans:D50524:-325 CT010291:-325



TATA-Box annotation


Distance to TSS:6194
Nearest PromoterID:NM_007498
Entrez ID:11910
Nearest Unigene:Mm.2706
Nearest Refseq:NM_007498
Nearest Ensembl:ENSMUSG00000026628
Gene Name:activating transcription factor 3
Gene Alias:LRG-21
Gene Description:activating transcription factor 3
Gene Type:protein-coding
CpG%:0.015
GC%:0.447761
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):