Difference between revisions of "TSS:Mm 999.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |A430105C05Rik= | ||
| + | |CLARP= | ||
| + | |Cash= | ||
| + | |Casper= | ||
| + | |ENSMUSG00000072980= | ||
| + | |FLAME= | ||
| + | |FLAME-1= | ||
| + | |Flip= | ||
| + | |Gm9845= | ||
| + | |I-FLICE= | ||
| + | |MRIT= | ||
|all_trans=BC085105:106 ENSMUST00000069333.7:-130 BC029223:-130 ENSMUST00000123553.1:-145 AK161220:-145 uc007bcr.1:-151 ENSMUST00000114309.7:-153 AK143812:-153 NM_009805:-161 NM_207653:-161 uc007bcp.1:-161 uc007bcq.3:-161 ENSMUST00000189858.1:429 AK053567:429 | |all_trans=BC085105:106 ENSMUST00000069333.7:-130 BC029223:-130 ENSMUST00000123553.1:-145 AK161220:-145 uc007bcr.1:-151 ENSMUST00000114309.7:-153 AK143812:-153 NM_009805:-161 NM_207653:-161 uc007bcp.1:-161 uc007bcq.3:-161 ENSMUST00000189858.1:429 AK053567:429 | ||
| + | |c-Flip= | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| Line 6: | Line 18: | ||
|distance_to_tss=166 | |distance_to_tss=166 | ||
|end=58713457 | |end=58713457 | ||
| + | |end_of_center_position=58713452 | ||
|entrez_id=12633 | |entrez_id=12633 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=2310024N18Rik | + | |gene_alias=2310024N18Rik |
|gene_description=CASP8 and FADD-like apoptosis regulator | |gene_description=CASP8 and FADD-like apoptosis regulator | ||
|gene_id=12633 | |gene_id=12633 | ||
| Line 24: | Line 37: | ||
|species=mouse | |species=mouse | ||
|start=58713446 | |start=58713446 | ||
| + | |start_of_center_position=58713451 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC085105 | |transcript_name=BC085105 | ||
Revision as of 18:31, 10 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 58713451 |
|---|---|
| End of the center position in the TSS region: | 58713452 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC085105 |
|---|---|
| Distance: | 106 |
| Num_trans: | 14 |
| All_trans: | BC085105:106 ENSMUST00000069333.7:-130 BC029223:-130 ENSMUST00000123553.1:-145 AK161220:-145 uc007bcr.1:-151 ENSMUST00000114309.7:-153 AK143812:-153 NM_009805:-161 NM_207653:-161 uc007bcp.1:-161 uc007bcq.3:-161 ENSMUST00000189858.1:429 AK053567:429 |
TATA-Box annotation
| Distance to TSS: | 166 |
|---|---|
| Nearest PromoterID: | NM_207653 |
| Entrez ID: | 12633 |
| Nearest Unigene: | Mm.336848 |
| Nearest Refseq: | NM_009805 |
| Nearest Ensembl: | ENSMUSG00000026031 |
| Gene Name: | CASP8 and FADD-like apoptosis regulator |
| Gene Alias: | 2310024N18Rik |
| Gene Description: | CASP8 and FADD-like apoptosis regulator |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
