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Difference between revisions of "TSS:Mm 9996.1"

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000067976.8:0 NM_144880:0 uc007eci.1:0 AK145397:0 BC059026:0 |chr=chr1 |cpg_percent=0.12 |distance=0 |distance_to_tss=7 |end=191397041 |entrez_...")
 
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|end_of_center_position=191397034
 
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|species=mouse
 
|species=mouse
 
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|start_of_center_position=191397033
 
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|transcript_name=ENSMUST00000067976.8 NM_144880 uc007eci.1 AK145397 BC059026
 
|transcript_name=ENSMUST00000067976.8 NM_144880 uc007eci.1 AK145397 BC059026

Revision as of 07:25, 11 May 2019

Basic information about the TSS


TSS ID:mm_9996.1
Species:mouse
Chr:chr1
TSS Classification:yes
Start:191397026
End:191397041
Strand:-
TSS Score:1
Start of the center position in the TSS region:191397033
End of the center position in the TSS region:191397034



Gene and protein annotation


Transcript_name:ENSMUST00000067976.8 NM_144880 uc007eci.1 AK145397 BC059026
Distance:0
GeneID:226849
HGNC/MGI_ID:MGI:2388479
UniProt_ID:Q3ULN8 Q6PD03
Gene_name:"protein phosphatase 2, regulatory subunit B', alpha"
Gene_symbol:Ppp2r5a
Gene_synonyms:
Gene_source:MGI:2388479



Transcript annotation


Transcript_name:ENSMUST00000067976.8 NM_144880 uc007eci.1 AK145397 BC059026
Distance:0
Num_trans:5
All_trans:ENSMUST00000067976.8:0 NM_144880:0 uc007eci.1:0 AK145397:0 BC059026:0



TATA-Box annotation


Distance to TSS:7
Nearest PromoterID:NM_144880
Entrez ID:226849
Nearest Unigene:Mm.205569
Nearest Refseq:NM_144880
Nearest Ensembl:ENSMUSG00000026626
Gene Name:"protein phosphatase 2, regulatory subunit B', alpha"
Gene Alias:PR61alpha
Gene Description:"protein phosphatase 2, regulatory subunit B', alpha"
Gene Type:protein-coding
CpG%:0.12
GC%:0.726368
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):