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Difference between revisions of "TSS:Mm 99964.1"

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|distance_to_tss=85
 
|distance_to_tss=85
 
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|end_of_center_position=113684497
 
|entrez_id=276852
 
|entrez_id=276852
 
|gc_percent=0.60199
 
|gc_percent=0.60199
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|species=mouse
 
|species=mouse
 
|start=113684487
 
|start=113684487
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|start_of_center_position=113684496
 
|strand=+
 
|strand=+
 
|transcript_name=ENSMUST00000106621.3 AK017508
 
|transcript_name=ENSMUST00000106621.3 AK017508

Revision as of 11:41, 12 May 2019

Basic information about the TSS


TSS ID:mm_99964.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:113684487
End:113684506
Strand:+
TSS Score:1
Start of the center position in the TSS region:113684496
End of the center position in the TSS region:113684497



Gene and protein annotation


Transcript_name:ENSMUST00000106621.3 AK017508
Distance:-41
GeneID:276852
HGNC/MGI_ID:MGI:106356
UniProt_ID:Q6PIX9
Gene_name:"DNA segment, Chr 11, Wayne State University 47, expressed"
Gene_symbol:D11Wsu47e
Gene_synonyms:
Gene_source:MGI:106356



Transcript annotation


Transcript_name:ENSMUST00000106621.3 AK017508
Distance:-41
Num_trans:12
All_trans:ENSMUST00000106621.3:-41 AK017508:-41 ENSMUST00000123466.1:-48 AK139389:-48 ENSMUST00000042227.14:-76 NM_177777:-76 uc007mex.1:-76 BC048942:-76 uc007mev.1:-82 uc007mew.1:-82 AK171307:-82 AK019727:-464



TATA-Box annotation


Distance to TSS:85
Nearest PromoterID:NM_177777
Entrez ID:276852
Nearest Unigene:Mm.239566
Nearest Refseq:NM_177777
Nearest Ensembl:ENSMUSG00000041623
Gene Name:"DNA segment, Chr 11, Wayne State University 47, expressed"
Gene Alias:-
Gene Description:"DNA segment, Chr 11, Wayne State University 47, expressed"
Gene Type:protein-coding
CpG%:0.08
GC%:0.60199
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):