Difference between revisions of "Template:TSSDetail"
From referenceTSS
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<tr><th scope="row" class="item_label_long">CpG%:</th><td class="ttb">{{{cpg_percent}}}</td></tr> | <tr><th scope="row" class="item_label_long">CpG%:</th><td class="ttb">{{{cpg_percent}}}</td></tr> | ||
<tr><th scope="row" class="item_label_long">GC%:</th><td class="ttb">{{{gc_percent}}}</td></tr> | <tr><th scope="row" class="item_label_long">GC%:</th><td class="ttb">{{{gc_percent}}}</td></tr> | ||
− | <tr><th scope="row" class="item_label_long">TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):</th><td class="ttb">{{{tata_box}}}</td></tr> | + | <tr><th scope="row" class="item_label_long">TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):</th><td class="ttb">{{{tata_box|}}}</td></tr> |
</table> | </table> | ||
{{#set:tss_id={{{tss_id}}}}} | {{#set:tss_id={{{tss_id}}}}} |
Revision as of 13:38, 29 March 2018
Basic information about the TSS
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Gene and protein annotation
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Transcript annotation
Transcript_name: | {{{transcript_name}}} |
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Distance: | {{{distance}}} |
Num_trans: | {{{num_trans}}} |
All_trans: | {{{all_trans}}} |
TATA-Box annotation
Distance to TSS: | {{{distance_to_tss}}} |
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Nearest PromoterID: | {{{nearest_promoter_id}}} |
Entrez ID: | {{{entrez_id}}} |
Nearest Unigene: | {{{nearest_unigene}}} |
Nearest Refseq: | {{{nearest_refseq}}} |
Nearest Ensembl: | {{{nearest_ensembl}}} |
Gene Name: | {{{gene_name}}} |
Gene Alias: | {{{gene_alias}}} |
Gene Description: | {{{gene_description}}} |
Gene Type: | {{{gene_type}}} |
CpG%: | {{{cpg_percent}}} |
GC%: | {{{gc_percent}}} |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
"{{{cpg_percent}}}" is not a number.
"{{{gc_percent}}}" is not a number.
"{{{start}}}" is not a number.
"{{{end}}}" is not a number.
"{{{tss_score}}}" is not a number.
"{{{num_trans}}}" is not a number.