Difference between revisions of "TSS:Hg 103623.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=7 |entrez_id=8644 |gc_percent=0.472637 |gene_alias=DD3|DDX|HA1753|HAKRB|HAKRe|HSD17B5|PGFS|hluPGFS |gene_description=aldo-keto redu...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |DDX= | ||
| + | |HA1753= | ||
| + | |HAKRB= | ||
| + | |HAKRe= | ||
| + | |HSD17B5= | ||
| + | |PGFS= | ||
| + | |all_trans=NM_001253909:0 NM_003739:0 BC001479:0 D17793:0 AB018580:7 ENST00000480697.6:15 uc057rja.1:15 AK296701:15 AK315411:17 AK290365:17 ENST00000605322.1:19 uc057rjb.1:19 AK310940:19 BC019230:23 S68288:36 AF149416:40 CU674730:46 CU676394:46 AM392923:46 DQ893860:46 GQ129450:46 GQ129451:46 AB383754:46 BT007286:46 DQ890679:46 KJ892585:46 KJ897885:46 KR710495:46 | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=0 | ||
|distance_to_tss=7 | |distance_to_tss=7 | ||
| + | |end=5094399 | ||
|entrez_id=8644 | |entrez_id=8644 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
|gene_alias=DD3|DDX|HA1753|HAKRB|HAKRe|HSD17B5|PGFS|hluPGFS | |gene_alias=DD3|DDX|HA1753|HAKRB|HAKRe|HSD17B5|PGFS|hluPGFS | ||
|gene_description=aldo-keto reductase family 1 member C3 | |gene_description=aldo-keto reductase family 1 member C3 | ||
| − | |gene_name=AKR1C3 | + | |gene_id=8644 |
| + | |gene_name="aldo-keto reductase family 1, member C3" | ||
| + | |gene_source=HGNC:386 | ||
| + | |gene_symbol=AKR1C3 | ||
| + | |gene_synonyms=DDX HAKRB KIAA0119 PGFS | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:386 | ||
| + | |hluPGFS= | ||
|nearest_ensembl=ENSG00000196139 | |nearest_ensembl=ENSG00000196139 | ||
|nearest_promoter_id=NM_003739 | |nearest_promoter_id=NM_003739 | ||
|nearest_refseq=NM_003739 | |nearest_refseq=NM_003739 | ||
|nearest_unigene=Hs.78183 | |nearest_unigene=Hs.78183 | ||
| + | |num_trans=28 | ||
| + | |species=human | ||
| + | |start=5094367 | ||
| + | |strand=+ | ||
|tata_box="-94(GACCATATAAGA,-,0.00)" | |tata_box="-94(GACCATATAAGA,-,0.00)" | ||
| + | |transcript_name=NM_001253909 NM_003739 BC001479 D17793 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103623.1 | |tss_id=hg_103623.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DKT3 P42330 | ||
}} | }} | ||
Revision as of 20:17, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001253909 NM_003739 BC001479 D17793 |
|---|---|
| Distance: | 0 |
| Num_trans: | 28 |
| All_trans: | NM_001253909:0 NM_003739:0 BC001479:0 D17793:0 AB018580:7 ENST00000480697.6:15 uc057rja.1:15 AK296701:15 AK315411:17 AK290365:17 ENST00000605322.1:19 uc057rjb.1:19 AK310940:19 BC019230:23 S68288:36 AF149416:40 CU674730:46 CU676394:46 AM392923:46 DQ893860:46 GQ129450:46 GQ129451:46 AB383754:46 BT007286:46 DQ890679:46 KJ892585:46 KJ897885:46 KR710495:46 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_003739 |
| Entrez ID: | 8644 |
| Nearest Unigene: | Hs.78183 |
| Nearest Refseq: | NM_003739 |
| Nearest Ensembl: | ENSG00000196139 |
| Gene Name: | "aldo-keto reductase family 1, member C3" |
| Gene Alias: | DD3 |
| Gene Description: | aldo-keto reductase family 1 member C3 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-94(GACCATATAAGA,-,0.00)" |
