Difference between revisions of "TSS:Hg 103640.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=167 |entrez_id=10276 |gc_percent=0.766169 |gene_alias=ARHGEF8|NET1A |gene_description=neuroepithelial cell transforming 1 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NET1A= | ||
| + | |all_trans=CU690984:-18 KJ892985:-18 AB587387:-20 S82401:-24 AB209852:-105 BC053553:-111 AK299335:-115 ENST00000355029.8:-159 NM_001047160:-159 uc001iia.5:-159 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=-18 | ||
|distance_to_tss=167 | |distance_to_tss=167 | ||
| + | |end=5412726 | ||
|entrez_id=10276 | |entrez_id=10276 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
|gene_alias=ARHGEF8|NET1A | |gene_alias=ARHGEF8|NET1A | ||
|gene_description=neuroepithelial cell transforming 1 | |gene_description=neuroepithelial cell transforming 1 | ||
| − | |gene_name=NET1 | + | |gene_id=10276 |
| + | |gene_name=neuroepithelial cell transforming 1 | ||
| + | |gene_source=HGNC:14592 | ||
| + | |gene_symbol=NET1 | ||
| + | |gene_synonyms=ARHGEF8 NET1A | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:14592 | ||
|nearest_ensembl=ENSG00000173848 | |nearest_ensembl=ENSG00000173848 | ||
|nearest_promoter_id=NM_001047160 | |nearest_promoter_id=NM_001047160 | ||
|nearest_refseq=NM_005863 | |nearest_refseq=NM_005863 | ||
|nearest_unigene=Hs.25155 | |nearest_unigene=Hs.25155 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=5412709 | ||
| + | |strand=+ | ||
| + | |transcript_name=CU690984 KJ892985 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103640.1 | |tss_id=hg_103640.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:18, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | CU690984 KJ892985 |
|---|---|
| Distance: | -18 |
| Num_trans: | 10 |
| All_trans: | CU690984:-18 KJ892985:-18 AB587387:-20 S82401:-24 AB209852:-105 BC053553:-111 AK299335:-115 ENST00000355029.8:-159 NM_001047160:-159 uc001iia.5:-159 |
TATA-Box annotation
| Distance to TSS: | 167 |
|---|---|
| Nearest PromoterID: | NM_001047160 |
| Entrez ID: | 10276 |
| Nearest Unigene: | Hs.25155 |
| Nearest Refseq: | NM_005863 |
| Nearest Ensembl: | ENSG00000173848 |
| Gene Name: | neuroepithelial cell transforming 1 |
| Gene Alias: | ARHGEF8 |
| Gene Description: | neuroepithelial cell transforming 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
