Difference between revisions of "TSS:Hg 103661.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.175 |distance_to_tss=39 |entrez_id=84893 |gc_percent=0.830846 |gene_alias=FBH1|Fbx18|hFBH1 |gene_description="F-box protein, helicase, 18" |gene_nam...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Fbx18= | ||
| + | |all_trans=ENST00000362091.8:0 ENST00000470089.5:0 uc001iis.5:0 uc057rkv.1:0 AK095343:0 AF456237:0 BC113375:0 BC113377:0 AF454502:0 BC110884:5 ENST00000462507.1:7 uc057rkw.1:7 ENST00000397269.7:-9 NM_001258453:-9 NM_178150:-9 uc057rku.1:-9 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| + | |distance=0 | ||
|distance_to_tss=39 | |distance_to_tss=39 | ||
| + | |end=5890273 | ||
|entrez_id=84893 | |entrez_id=84893 | ||
|gc_percent=0.830846 | |gc_percent=0.830846 | ||
|gene_alias=FBH1|Fbx18|hFBH1 | |gene_alias=FBH1|Fbx18|hFBH1 | ||
|gene_description="F-box protein, helicase, 18" | |gene_description="F-box protein, helicase, 18" | ||
| − | |gene_name=FBXO18 | + | |gene_id=84893 |
| + | |gene_name="F-box protein, helicase, 18" | ||
| + | |gene_source=HGNC:13620 | ||
| + | |gene_symbol=FBXO18 | ||
| + | |gene_synonyms=FBH1 FLJ14590 Fbx18 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hFBH1= | ||
| + | |hgnc_mgi_id=HGNC:13620 | ||
|nearest_ensembl=ENSG00000134452 | |nearest_ensembl=ENSG00000134452 | ||
|nearest_promoter_id=NM_178150 | |nearest_promoter_id=NM_178150 | ||
|nearest_refseq=NM_032807 | |nearest_refseq=NM_032807 | ||
|nearest_unigene=Hs.498543 | |nearest_unigene=Hs.498543 | ||
| + | |num_trans=16 | ||
| + | |species=human | ||
| + | |start=5890211 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000362091.8 ENST00000470089.5 uc001iis.5 uc057rkv.1 AK095343 AF456237 BC113375 BC113377 AF454502 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103661.1 | |tss_id=hg_103661.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q14DG0 Q8NFZ0 | ||
}} | }} | ||
Revision as of 20:18, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000362091.8 ENST00000470089.5 uc001iis.5 uc057rkv.1 AK095343 AF456237 BC113375 BC113377 AF454502 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000362091.8:0 ENST00000470089.5:0 uc001iis.5:0 uc057rkv.1:0 AK095343:0 AF456237:0 BC113375:0 BC113377:0 AF454502:0 BC110884:5 ENST00000462507.1:7 uc057rkw.1:7 ENST00000397269.7:-9 NM_001258453:-9 NM_178150:-9 uc057rku.1:-9 |
TATA-Box annotation
| Distance to TSS: | 39 |
|---|---|
| Nearest PromoterID: | NM_178150 |
| Entrez ID: | 84893 |
| Nearest Unigene: | Hs.498543 |
| Nearest Refseq: | NM_032807 |
| Nearest Ensembl: | ENSG00000134452 |
| Gene Name: | "F-box protein, helicase, 18" |
| Gene Alias: | FBH1 |
| Gene Description: | "F-box protein, helicase, 18" |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.830846 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
