Difference between revisions of "TSS:Hg 103723.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-5 |entrez_id=108570035 |gc_percent=0.557214 |gene_alias=- |gene_description=lncRNA in nonhomologous end joining pathway 1 |gene...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000417112.1:0 uc057rod.1:0 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=0 | ||
|distance_to_tss=-5 | |distance_to_tss=-5 | ||
| + | |end=6737389 | ||
|entrez_id=108570035 | |entrez_id=108570035 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_138480 | |nearest_refseq=NR_138480 | ||
|nearest_unigene=Hs.568834 | |nearest_unigene=Hs.568834 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=6737364 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000417112.1 uc057rod.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103723.1 | |tss_id=hg_103723.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 20:21, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000417112.1 uc057rod.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | ENST00000417112.1:0 uc057rod.1:0 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NR_138480 |
| Entrez ID: | 108570035 |
| Nearest Unigene: | Hs.568834 |
| Nearest Refseq: | NR_138480 |
| Nearest Ensembl: | |
| Gene Name: | LINP1 |
| Gene Alias: | - |
| Gene Description: | lncRNA in nonhomologous end joining pathway 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
