Difference between revisions of "TSS:Hg 10378.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-221 |entrez_id=9249 |gc_percent=0.567164 |gene_alias=DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 |gene_description=dehydrogenase/r...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |RDH17= | ||
| + | |Rsdr1= | ||
| + | |SDR1= | ||
| + | |SDR16C1= | ||
| + | |all_trans=ENST00000430996.2:300 uc001aue.2:300 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=300 | ||
|distance_to_tss=-221 | |distance_to_tss=-221 | ||
| + | |end=12596626 | ||
|entrez_id=9249 | |entrez_id=9249 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
|gene_alias=DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 | |gene_alias=DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 | ||
|gene_description=dehydrogenase/reductase 3 | |gene_description=dehydrogenase/reductase 3 | ||
| − | |gene_name=DHRS3 | + | |gene_id=9249 |
| + | |gene_name=dehydrogenase/reductase (SDR family) member 3 | ||
| + | |gene_source=HGNC:17693 | ||
| + | |gene_symbol=DHRS3 | ||
| + | |gene_synonyms=RDH17 Rsdr1 SDR1 SDR16C1 retSDR1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17693 | ||
|nearest_ensembl=ENSG00000162496 | |nearest_ensembl=ENSG00000162496 | ||
|nearest_promoter_id=NM_001324370 | |nearest_promoter_id=NM_001324370 | ||
|nearest_refseq=NM_004753 | |nearest_refseq=NM_004753 | ||
|nearest_unigene=Hs.289347 | |nearest_unigene=Hs.289347 | ||
| + | |num_trans=2 | ||
| + | |retSDR1= | ||
| + | |species=human | ||
| + | |start=12596607 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000430996.2 uc001aue.2 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10378.1 | |tss_id=hg_10378.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5SUY4 | ||
}} | }} | ||
Revision as of 20:24, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000430996.2 uc001aue.2 |
|---|---|
| Distance: | 300 |
| Num_trans: | 2 |
| All_trans: | ENST00000430996.2:300 uc001aue.2:300 |
TATA-Box annotation
| Distance to TSS: | -221 |
|---|---|
| Nearest PromoterID: | NM_001324370 |
| Entrez ID: | 9249 |
| Nearest Unigene: | Hs.289347 |
| Nearest Refseq: | NM_004753 |
| Nearest Ensembl: | ENSG00000162496 |
| Gene Name: | dehydrogenase/reductase (SDR family) member 3 |
| Gene Alias: | DD83.1 |
| Gene Description: | dehydrogenase/reductase 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
