Difference between revisions of "TSS:Hg 103799.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=1042 |entrez_id=2625 |gc_percent=0.676617 |gene_alias=HDR|HDRS |gene_description=GATA binding protein 3 |gene_name=GATA3 |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HDRS= | ||
| + | |all_trans=KJ896866:-84 CU678358:-85 KJ905755:-85 AM392571:-86 AM392688:-86 AB463676:-87 M69106:-206 X55037:-211 X58072:-236 X55122:-285 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| + | |distance=-84 | ||
|distance_to_tss=1042 | |distance_to_tss=1042 | ||
| + | |end=8055752 | ||
|entrez_id=2625 | |entrez_id=2625 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_002051 | |nearest_refseq=NM_002051 | ||
|nearest_unigene=Hs.524134 | |nearest_unigene=Hs.524134 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=8055739 | ||
| + | |strand=+ | ||
| + | |transcript_name=KJ896866 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103799.1 | |tss_id=hg_103799.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 20:24, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | KJ896866 |
|---|---|
| Distance: | -84 |
| Num_trans: | 10 |
| All_trans: | KJ896866:-84 CU678358:-85 KJ905755:-85 AM392571:-86 AM392688:-86 AB463676:-87 M69106:-206 X55037:-211 X58072:-236 X55122:-285 |
TATA-Box annotation
| Distance to TSS: | 1042 |
|---|---|
| Nearest PromoterID: | NM_001002295 |
| Entrez ID: | 2625 |
| Nearest Unigene: | Hs.524134 |
| Nearest Refseq: | NM_002051 |
| Nearest Ensembl: | ENSG00000107485 |
| Gene Name: | GATA3 |
| Gene Alias: | HDR |
| Gene Description: | GATA binding protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
