Difference between revisions of "TSS:Hg 10390.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=-54 |entrez_id=9249 |gc_percent=0.432836 |gene_alias=DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 |gene_description=dehydrogenase/red...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |RDH17= | ||
| + | |Rsdr1= | ||
| + | |SDR1= | ||
| + | |SDR16C1= | ||
| + | |all_trans=ENST00000616661.4:45 NM_004753:45 uc031tpa.2:45 BX648476:45 AK312961:90 AK309282:94 AY358093:138 AK310202:143 BC002730:313 AK222593:374 AF061741:375 CU678154:427 KJ897985:428 DQ893006:428 DQ896252:428 DQ426869:433 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| + | |distance=45 | ||
|distance_to_tss=-54 | |distance_to_tss=-54 | ||
| + | |end=12617795 | ||
|entrez_id=9249 | |entrez_id=9249 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
|gene_alias=DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 | |gene_alias=DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 | ||
|gene_description=dehydrogenase/reductase 3 | |gene_description=dehydrogenase/reductase 3 | ||
| − | |gene_name=DHRS3 | + | |gene_id=9249 |
| + | |gene_name=dehydrogenase/reductase (SDR family) member 3 | ||
| + | |gene_source=HGNC:17693 | ||
| + | |gene_symbol=DHRS3 | ||
| + | |gene_synonyms=RDH17 Rsdr1 SDR1 SDR16C1 retSDR1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17693 | ||
|nearest_ensembl=ENSG00000162496 | |nearest_ensembl=ENSG00000162496 | ||
|nearest_promoter_id=NM_004753 | |nearest_promoter_id=NM_004753 | ||
|nearest_refseq=NM_004753 | |nearest_refseq=NM_004753 | ||
|nearest_unigene=Hs.289347 | |nearest_unigene=Hs.289347 | ||
| + | |num_trans=16 | ||
| + | |retSDR1= | ||
| + | |species=human | ||
| + | |start=12617775 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000616661.4 NM_004753 uc031tpa.2 BX648476 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10390.1 | |tss_id=hg_10390.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O75911 | ||
}} | }} | ||
Revision as of 20:29, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000616661.4 NM_004753 uc031tpa.2 BX648476 |
|---|---|
| Distance: | 45 |
| Num_trans: | 16 |
| All_trans: | ENST00000616661.4:45 NM_004753:45 uc031tpa.2:45 BX648476:45 AK312961:90 AK309282:94 AY358093:138 AK310202:143 BC002730:313 AK222593:374 AF061741:375 CU678154:427 KJ897985:428 DQ893006:428 DQ896252:428 DQ426869:433 |
TATA-Box annotation
| Distance to TSS: | -54 |
|---|---|
| Nearest PromoterID: | NM_004753 |
| Entrez ID: | 9249 |
| Nearest Unigene: | Hs.289347 |
| Nearest Refseq: | NM_004753 |
| Nearest Ensembl: | ENSG00000162496 |
| Gene Name: | dehydrogenase/reductase (SDR family) member 3 |
| Gene Alias: | DD83.1 |
| Gene Description: | dehydrogenase/reductase 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
