Difference between revisions of "TSS:Hg 103907.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.095 |distance_to_tss=83 |entrez_id=55526 |gc_percent=0.706468 |gene_alias=AMOXAD|CMT2Q |gene_description=dehydrogenase E1 and transketolase domain c...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CMT2Q= | ||
| + | |all_trans=ENST00000263035.8:0 ENST00000437298.1:0 uc001ild.6:0 uc057rrs.1:0 BC002477:0 BC007955:0 AB046850:0 AK309810:0 CU675875:0 KJ899148:0 NM_018706:-48 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| + | |distance=0 | ||
|distance_to_tss=83 | |distance_to_tss=83 | ||
| + | |end=12069035 | ||
|entrez_id=55526 | |entrez_id=55526 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
|gene_alias=AMOXAD|CMT2Q | |gene_alias=AMOXAD|CMT2Q | ||
|gene_description=dehydrogenase E1 and transketolase domain containing 1 | |gene_description=dehydrogenase E1 and transketolase domain containing 1 | ||
| − | |gene_name=DHTKD1 | + | |gene_id=55526 |
| + | |gene_name=dehydrogenase E1 and transketolase domain containing 1 | ||
| + | |gene_source=HGNC:23537 | ||
| + | |gene_symbol=DHTKD1 | ||
| + | |gene_synonyms=CMT2Q DKFZP762M115 KIAA1630 MGC3090 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23537 | ||
|nearest_ensembl=ENSG00000181192 | |nearest_ensembl=ENSG00000181192 | ||
|nearest_promoter_id=NM_018706 | |nearest_promoter_id=NM_018706 | ||
|nearest_refseq=NM_018706 | |nearest_refseq=NM_018706 | ||
|nearest_unigene=Hs.104980 | |nearest_unigene=Hs.104980 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=12068964 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000263035.8 ENST00000437298.1 uc001ild.6 uc057rrs.1 BC002477 BC007955 AB046850 AK309810 CU675875 KJ899148 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103907.1 | |tss_id=hg_103907.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=C9JWN1 Q96HY7 | ||
}} | }} | ||
Revision as of 20:29, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000263035.8 ENST00000437298.1 uc001ild.6 uc057rrs.1 BC002477 BC007955 AB046850 AK309810 CU675875 KJ899148 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000263035.8:0 ENST00000437298.1:0 uc001ild.6:0 uc057rrs.1:0 BC002477:0 BC007955:0 AB046850:0 AK309810:0 CU675875:0 KJ899148:0 NM_018706:-48 |
TATA-Box annotation
| Distance to TSS: | 83 |
|---|---|
| Nearest PromoterID: | NM_018706 |
| Entrez ID: | 55526 |
| Nearest Unigene: | Hs.104980 |
| Nearest Refseq: | NM_018706 |
| Nearest Ensembl: | ENSG00000181192 |
| Gene Name: | dehydrogenase E1 and transketolase domain containing 1 |
| Gene Alias: | AMOXAD |
| Gene Description: | dehydrogenase E1 and transketolase domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
