Difference between revisions of "TSS:Hg 103912.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=-8 |entrez_id=8872 |gc_percent=0.527363 |gene_alias=C10orf7|D123 |gene_description=cell division cycle 123 |gene_name=CDC123 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |D123= | ||
| + | |all_trans=ENST00000429258.6:0 ENST00000281141.8:0 NM_006023:0 uc057rsq.1:0 uc001ill.4:0 D14878:0 AK225634:13 ENST00000455773.7:147 uc057rsr.1:147 U27112:201 AK308790:205 ENST00000467016.1:213 uc057rss.1:213 BC009598:214 BC001600:229 ENST00000378900.6:240 uc057rst.1:240 AK289362:242 ENST00000442050.5:249 uc057rsu.1:249 CR456966:263 KJ892641:263 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=0 | ||
|distance_to_tss=-8 | |distance_to_tss=-8 | ||
| + | |end=12195983 | ||
|entrez_id=8872 | |entrez_id=8872 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
|gene_alias=C10orf7|D123 | |gene_alias=C10orf7|D123 | ||
|gene_description=cell division cycle 123 | |gene_description=cell division cycle 123 | ||
| − | |gene_name=CDC123 | + | |gene_id=8872 |
| + | |gene_name=cell division cycle 123 | ||
| + | |gene_source=HGNC:16827 | ||
| + | |gene_symbol=CDC123 | ||
| + | |gene_synonyms=D123 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16827 | ||
|nearest_ensembl=ENSG00000151465 | |nearest_ensembl=ENSG00000151465 | ||
|nearest_promoter_id=NM_006023 | |nearest_promoter_id=NM_006023 | ||
|nearest_refseq=NM_006023 | |nearest_refseq=NM_006023 | ||
|nearest_unigene=Hs.412842 | |nearest_unigene=Hs.412842 | ||
| + | |num_trans=22 | ||
| + | |species=human | ||
| + | |start=12195925 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000429258.6 ENST00000281141.8 NM_006023 uc057rsq.1 uc001ill.4 D14878 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103912.1 | |tss_id=hg_103912.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O75794 X6RKY7 | ||
}} | }} | ||
Revision as of 20:29, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000429258.6 ENST00000281141.8 NM_006023 uc057rsq.1 uc001ill.4 D14878 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENST00000429258.6:0 ENST00000281141.8:0 NM_006023:0 uc057rsq.1:0 uc001ill.4:0 D14878:0 AK225634:13 ENST00000455773.7:147 uc057rsr.1:147 U27112:201 AK308790:205 ENST00000467016.1:213 uc057rss.1:213 BC009598:214 BC001600:229 ENST00000378900.6:240 uc057rst.1:240 AK289362:242 ENST00000442050.5:249 uc057rsu.1:249 CR456966:263 KJ892641:263 |
TATA-Box annotation
| Distance to TSS: | -8 |
|---|---|
| Nearest PromoterID: | NM_006023 |
| Entrez ID: | 8872 |
| Nearest Unigene: | Hs.412842 |
| Nearest Refseq: | NM_006023 |
| Nearest Ensembl: | ENSG00000151465 |
| Gene Name: | cell division cycle 123 |
| Gene Alias: | C10orf7 |
| Gene Description: | cell division cycle 123 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
