Difference between revisions of "TSS:Hg 103913.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=-63 |entrez_id=11164 |gc_percent=0.621891 |gene_alias=YSA1|YSA1H|YSAH1|hNUDT5 |gene_description=nudix hydrolase 5 |gene_name=NU...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |YSA1H= | ||
| + | |YSAH1= | ||
| + | |all_trans=ENST00000467016.1:0 ENST00000378900.6:0 ENST00000442050.5:0 uc057rss.1:0 uc057rst.1:0 uc057rsu.1:0 U27112:0 AK308790:0 BC009598:0 BC001600:0 AK289362:0 CR456966:4 KJ892641:4 ENST00000455773.7:-43 uc057rsr.1:-43 AK225634:-177 ENST00000281141.8:-207 uc001ill.4:-207 D14878:-207 ENST00000429258.6:-208 uc057rsq.1:-208 NM_006023:-211 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=0 | ||
|distance_to_tss=-63 | |distance_to_tss=-63 | ||
| + | |end=12196242 | ||
|entrez_id=11164 | |entrez_id=11164 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
|gene_alias=YSA1|YSA1H|YSAH1|hNUDT5 | |gene_alias=YSA1|YSA1H|YSAH1|hNUDT5 | ||
|gene_description=nudix hydrolase 5 | |gene_description=nudix hydrolase 5 | ||
| − | |gene_name= | + | |gene_id=8872 |
| + | |gene_name=cell division cycle 123 | ||
| + | |gene_source=HGNC:16827 | ||
| + | |gene_symbol=CDC123 | ||
| + | |gene_synonyms=D123 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hNUDT5= | ||
| + | |hgnc_mgi_id=HGNC:16827 | ||
|nearest_ensembl=ENSG00000165609 | |nearest_ensembl=ENSG00000165609 | ||
|nearest_promoter_id=NM_001321647 | |nearest_promoter_id=NM_001321647 | ||
|nearest_refseq=NM_014142 | |nearest_refseq=NM_014142 | ||
|nearest_unigene=Hs.555956 | |nearest_unigene=Hs.555956 | ||
| + | |num_trans=22 | ||
| + | |species=human | ||
| + | |start=12196172 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000467016.1 ENST00000378900.6 ENST00000442050.5 uc057rss.1 uc057rst.1 uc057rsu.1 U27112 AK308790 BC009598 BC001600 AK289362 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103913.1 | |tss_id=hg_103913.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=X6RA30 X6RF82 | ||
}} | }} | ||
Revision as of 20:29, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000467016.1 ENST00000378900.6 ENST00000442050.5 uc057rss.1 uc057rst.1 uc057rsu.1 U27112 AK308790 BC009598 BC001600 AK289362 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENST00000467016.1:0 ENST00000378900.6:0 ENST00000442050.5:0 uc057rss.1:0 uc057rst.1:0 uc057rsu.1:0 U27112:0 AK308790:0 BC009598:0 BC001600:0 AK289362:0 CR456966:4 KJ892641:4 ENST00000455773.7:-43 uc057rsr.1:-43 AK225634:-177 ENST00000281141.8:-207 uc001ill.4:-207 D14878:-207 ENST00000429258.6:-208 uc057rsq.1:-208 NM_006023:-211 |
TATA-Box annotation
| Distance to TSS: | -63 |
|---|---|
| Nearest PromoterID: | NM_001321647 |
| Entrez ID: | 11164 |
| Nearest Unigene: | Hs.555956 |
| Nearest Refseq: | NM_014142 |
| Nearest Ensembl: | ENSG00000165609 |
| Gene Name: | cell division cycle 123 |
| Gene Alias: | YSA1 |
| Gene Description: | nudix hydrolase 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
