Difference between revisions of "TSS:Hg 103985.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=214 |entrez_id=51182 |gc_percent=0.696517 |gene_alias=HSP70-4|HSP70L1 |gene_description=heat shock protein family A (Hsp70) mem...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HSP70L1= | ||
| + | |all_trans=AK292323:-14 AF143723:-16 AB528152:19 AB587406:19 KJ902567:19 KJ893846:19 BC119690:-25 BC119691:-25 AF112210:-25 ENST00000493178.1:-35 uc057ryk.1:-35 BC038845:-36 BC065281:-37 AK000880:-47 AK302452:-50 AK225265:-50 AK225651:-50 ENST00000441647.1:54 uc057ryl.1:54 ENST00000437161.6:-64 uc001ine.5:-64 ENST00000493863.5:-137 uc057ryj.1:-137 BC108738:-140 ENST00000378372.7:-202 uc001inf.5:-202 NM_016299:-206 NM_001278205:-206 NR_103464:-206 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=-14 | ||
|distance_to_tss=214 | |distance_to_tss=214 | ||
| + | |end=14838383 | ||
|entrez_id=51182 | |entrez_id=51182 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
|gene_alias=HSP70-4|HSP70L1 | |gene_alias=HSP70-4|HSP70L1 | ||
|gene_description=heat shock protein family A (Hsp70) member 14 | |gene_description=heat shock protein family A (Hsp70) member 14 | ||
| − | |gene_name=HSPA14 | + | |gene_id=51182 |
| + | |gene_name=heat shock protein family A (Hsp70) member 14 | ||
| + | |gene_source=HGNC:29526 | ||
| + | |gene_symbol=HSPA14 | ||
| + | |gene_synonyms=HSP70-4 HSP70L1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29526 | ||
|nearest_ensembl=ENSG00000187522 | |nearest_ensembl=ENSG00000187522 | ||
|nearest_promoter_id=NR_103464 | |nearest_promoter_id=NR_103464 | ||
|nearest_refseq=NM_016299 | |nearest_refseq=NM_016299 | ||
|nearest_unigene=Hs.534169 | |nearest_unigene=Hs.534169 | ||
| + | |num_trans=29 | ||
| + | |species=human | ||
| + | |start=14838365 | ||
| + | |strand=+ | ||
|tata_box="75(CCGTCTATAAGG,-,0.00)" | |tata_box="75(CCGTCTATAAGG,-,0.00)" | ||
| + | |transcript_name=AK292323 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103985.1 | |tss_id=hg_103985.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:33, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK292323 |
|---|---|
| Distance: | -14 |
| Num_trans: | 29 |
| All_trans: | AK292323:-14 AF143723:-16 AB528152:19 AB587406:19 KJ902567:19 KJ893846:19 BC119690:-25 BC119691:-25 AF112210:-25 ENST00000493178.1:-35 uc057ryk.1:-35 BC038845:-36 BC065281:-37 AK000880:-47 AK302452:-50 AK225265:-50 AK225651:-50 ENST00000441647.1:54 uc057ryl.1:54 ENST00000437161.6:-64 uc001ine.5:-64 ENST00000493863.5:-137 uc057ryj.1:-137 BC108738:-140 ENST00000378372.7:-202 uc001inf.5:-202 NM_016299:-206 NM_001278205:-206 NR_103464:-206 |
TATA-Box annotation
| Distance to TSS: | 214 |
|---|---|
| Nearest PromoterID: | NR_103464 |
| Entrez ID: | 51182 |
| Nearest Unigene: | Hs.534169 |
| Nearest Refseq: | NM_016299 |
| Nearest Ensembl: | ENSG00000187522 |
| Gene Name: | heat shock protein family A (Hsp70) member 14 |
| Gene Alias: | HSP70-4 |
| Gene Description: | heat shock protein family A (Hsp70) member 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "75(CCGTCTATAAGG,-,0.00)" |
