Difference between revisions of "TSS:Hg 104003.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=-81 |entrez_id=221060 |gc_percent=0.751244 |gene_alias=bA455B2.4 |gene_description=chromosome 10 open reading frame 111 |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC029494:0 U77664:-11 ENST00000378197.4:-14 uc001iny.6:-14 AK057006:-14 ENST00000441850.1:15 uc057rzm.1:15 ENST00000378202.5:-65 uc001inx.6:-65 ENST00000451677.1:-159 uc057rzl.1:-159 ENST00000378201.6:-181 uc057rzk.1:-181 AK223418:-193 ENST00000378203.5:-216 ENST00000616640.1:-216 NM_183005:-216 NM_001097590:-216 NM_006414:-216 NM_001265601:-216 uc009xjm.5:-216 uc031pth.2:-216 AF079567:219 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=0 | ||
|distance_to_tss=-81 | |distance_to_tss=-81 | ||
| + | |end=15097405 | ||
|entrez_id=221060 | |entrez_id=221060 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
|gene_alias=bA455B2.4 | |gene_alias=bA455B2.4 | ||
|gene_description=chromosome 10 open reading frame 111 | |gene_description=chromosome 10 open reading frame 111 | ||
| − | |gene_name= | + | |gene_id=10557 |
| + | |gene_name=ribonuclease P/MRP 38kDa subunit | ||
| + | |gene_source=HGNC:30329 | ||
| + | |gene_symbol=RPP38 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30329 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NM_153244 | |nearest_promoter_id=NM_153244 | ||
|nearest_refseq=NM_153244 | |nearest_refseq=NM_153244 | ||
|nearest_unigene=Hs.567777 | |nearest_unigene=Hs.567777 | ||
| + | |num_trans=23 | ||
| + | |species=human | ||
| + | |start=15097395 | ||
| + | |strand=+ | ||
| + | |transcript_name=BC029494 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104003.1 | |tss_id=hg_104003.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:33, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC029494 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | BC029494:0 U77664:-11 ENST00000378197.4:-14 uc001iny.6:-14 AK057006:-14 ENST00000441850.1:15 uc057rzm.1:15 ENST00000378202.5:-65 uc001inx.6:-65 ENST00000451677.1:-159 uc057rzl.1:-159 ENST00000378201.6:-181 uc057rzk.1:-181 AK223418:-193 ENST00000378203.5:-216 ENST00000616640.1:-216 NM_183005:-216 NM_001097590:-216 NM_006414:-216 NM_001265601:-216 uc009xjm.5:-216 uc031pth.2:-216 AF079567:219 |
TATA-Box annotation
| Distance to TSS: | -81 |
|---|---|
| Nearest PromoterID: | NM_153244 |
| Entrez ID: | 221060 |
| Nearest Unigene: | Hs.567777 |
| Nearest Refseq: | NM_153244 |
| Nearest Ensembl: | |
| Gene Name: | ribonuclease P/MRP 38kDa subunit |
| Gene Alias: | bA455B2.4 |
| Gene Description: | chromosome 10 open reading frame 111 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
