Difference between revisions of "TSS:Hg 104004.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=-414 |entrez_id=221060 |gc_percent=0.61194 |gene_alias=bA455B2.4 |gene_description=chromosome 10 open reading frame 111 |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AF079567:-100 ENST00000441850.1:-304 uc057rzm.1:-304 BC029494:-325 U77664:-339 ENST00000378197.4:-342 uc001iny.6:-342 AK057006:-342 ENST00000378202.5:-393 uc001inx.6:-393 ENST00000451677.1:-487 uc057rzl.1:-487 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=-100 | ||
|distance_to_tss=-414 | |distance_to_tss=-414 | ||
| + | |end=15097742 | ||
|entrez_id=221060 | |entrez_id=221060 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
|gene_alias=bA455B2.4 | |gene_alias=bA455B2.4 | ||
|gene_description=chromosome 10 open reading frame 111 | |gene_description=chromosome 10 open reading frame 111 | ||
| − | |gene_name= | + | |gene_id=10557 |
| + | |gene_name=ribonuclease P/MRP 38kDa subunit | ||
| + | |gene_source=HGNC:30329 | ||
| + | |gene_symbol=RPP38 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30329 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NM_153244 | |nearest_promoter_id=NM_153244 | ||
|nearest_refseq=NM_153244 | |nearest_refseq=NM_153244 | ||
|nearest_unigene=Hs.567777 | |nearest_unigene=Hs.567777 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=15097723 | ||
| + | |strand=+ | ||
| + | |transcript_name=AF079567 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104004.1 | |tss_id=hg_104004.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:33, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF079567 |
|---|---|
| Distance: | -100 |
| Num_trans: | 12 |
| All_trans: | AF079567:-100 ENST00000441850.1:-304 uc057rzm.1:-304 BC029494:-325 U77664:-339 ENST00000378197.4:-342 uc001iny.6:-342 AK057006:-342 ENST00000378202.5:-393 uc001inx.6:-393 ENST00000451677.1:-487 uc057rzl.1:-487 |
TATA-Box annotation
| Distance to TSS: | -414 |
|---|---|
| Nearest PromoterID: | NM_153244 |
| Entrez ID: | 221060 |
| Nearest Unigene: | Hs.567777 |
| Nearest Refseq: | NM_153244 |
| Nearest Ensembl: | |
| Gene Name: | ribonuclease P/MRP 38kDa subunit |
| Gene Alias: | bA455B2.4 |
| Gene Description: | chromosome 10 open reading frame 111 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
