Difference between revisions of "TSS:Hg 104005.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.08 |distance_to_tss=-447 |entrez_id=221060 |gc_percent=0.60199 |gene_alias=bA455B2.4 |gene_description=chromosome 10 open reading frame 111 |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AF079567:-125 ENST00000441850.1:-329 uc057rzm.1:-329 BC029494:-350 U77664:-364 ENST00000378197.4:-367 uc001iny.6:-367 AK057006:-367 ENST00000378202.5:-418 uc001inx.6:-418 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| + | |distance=-125 | ||
|distance_to_tss=-447 | |distance_to_tss=-447 | ||
| + | |end=15097783 | ||
|entrez_id=221060 | |entrez_id=221060 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
|gene_alias=bA455B2.4 | |gene_alias=bA455B2.4 | ||
|gene_description=chromosome 10 open reading frame 111 | |gene_description=chromosome 10 open reading frame 111 | ||
| − | |gene_name= | + | |gene_id=10557 |
| + | |gene_name=ribonuclease P/MRP 38kDa subunit | ||
| + | |gene_source=HGNC:30329 | ||
| + | |gene_symbol=RPP38 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30329 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NM_153244 | |nearest_promoter_id=NM_153244 | ||
|nearest_refseq=NM_153244 | |nearest_refseq=NM_153244 | ||
|nearest_unigene=Hs.567777 | |nearest_unigene=Hs.567777 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=15097748 | ||
| + | |strand=+ | ||
| + | |transcript_name=AF079567 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104005.1 | |tss_id=hg_104005.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:33, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF079567 |
|---|---|
| Distance: | -125 |
| Num_trans: | 10 |
| All_trans: | AF079567:-125 ENST00000441850.1:-329 uc057rzm.1:-329 BC029494:-350 U77664:-364 ENST00000378197.4:-367 uc001iny.6:-367 AK057006:-367 ENST00000378202.5:-418 uc001inx.6:-418 |
TATA-Box annotation
| Distance to TSS: | -447 |
|---|---|
| Nearest PromoterID: | NM_153244 |
| Entrez ID: | 221060 |
| Nearest Unigene: | Hs.567777 |
| Nearest Refseq: | NM_153244 |
| Nearest Ensembl: | |
| Gene Name: | ribonuclease P/MRP 38kDa subunit |
| Gene Alias: | bA455B2.4 |
| Gene Description: | chromosome 10 open reading frame 111 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
