Difference between revisions of "TSS:Hg 104009.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=29 |entrez_id=9317 |gc_percent=0.641791 |gene_alias=HPHRP|RPR-1 |gene_description=phosphotriesterase related |gene_name=PTER |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |RPR-1= | ||
| + | |all_trans=BC050411:0 BX648556:0 BC015092:-4 ENST00000378000.5:8 uc001ioh.3:8 AK095486:8 ENST00000535784.6:-25 ENST00000423462.6:-25 NM_001261837:-25 NM_001261836:-25 NM_030664:-25 NM_001261838:-25 NM_001001484:-25 uc001ioi.3:-25 uc031pti.1:-25 AK314910:-25 AF212237:56 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=0 | ||
|distance_to_tss=29 | |distance_to_tss=29 | ||
| + | |end=16436976 | ||
|entrez_id=9317 | |entrez_id=9317 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
|gene_alias=HPHRP|RPR-1 | |gene_alias=HPHRP|RPR-1 | ||
|gene_description=phosphotriesterase related | |gene_description=phosphotriesterase related | ||
| − | |gene_name=PTER | + | |gene_id=9317 |
| + | |gene_name=phosphotriesterase related | ||
| + | |gene_source=HGNC:9590 | ||
| + | |gene_symbol=PTER | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9590 | ||
|nearest_ensembl=ENSG00000165983 | |nearest_ensembl=ENSG00000165983 | ||
|nearest_promoter_id=NM_030664 | |nearest_promoter_id=NM_030664 | ||
|nearest_refseq=NM_030664 | |nearest_refseq=NM_030664 | ||
|nearest_unigene=Hs.444321 | |nearest_unigene=Hs.444321 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=16436967 | ||
| + | |strand=+ | ||
| + | |transcript_name=BC050411 BX648556 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104009.1 | |tss_id=hg_104009.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:34, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC050411 BX648556 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | BC050411:0 BX648556:0 BC015092:-4 ENST00000378000.5:8 uc001ioh.3:8 AK095486:8 ENST00000535784.6:-25 ENST00000423462.6:-25 NM_001261837:-25 NM_001261836:-25 NM_030664:-25 NM_001261838:-25 NM_001001484:-25 uc001ioi.3:-25 uc031pti.1:-25 AK314910:-25 AF212237:56 |
TATA-Box annotation
| Distance to TSS: | 29 |
|---|---|
| Nearest PromoterID: | NM_030664 |
| Entrez ID: | 9317 |
| Nearest Unigene: | Hs.444321 |
| Nearest Refseq: | NM_030664 |
| Nearest Ensembl: | ENSG00000165983 |
| Gene Name: | phosphotriesterase related |
| Gene Alias: | HPHRP |
| Gene Description: | phosphotriesterase related |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
