Difference between revisions of "TSS:Hg 104011.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=39062 |entrez_id=9317 |gc_percent=0.268657 |gene_alias=HPHRP|RPR-1 |gene_description=phosphotriesterase related |gene_name=PTER |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |RPR-1= | ||
| + | |all_trans=ENST00000411224.1:-2 uc057sae.1:-2 | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=-2 | ||
|distance_to_tss=39062 | |distance_to_tss=39062 | ||
| + | |end=16476006 | ||
|entrez_id=9317 | |entrez_id=9317 | ||
|gc_percent=0.268657 | |gc_percent=0.268657 | ||
|gene_alias=HPHRP|RPR-1 | |gene_alias=HPHRP|RPR-1 | ||
|gene_description=phosphotriesterase related | |gene_description=phosphotriesterase related | ||
| − | |gene_name= | + | |gene_id= |
| + | |gene_name="RNA, U2 small nuclear 18, pseudogene" | ||
| + | |gene_source=HGNC:48511 | ||
| + | |gene_symbol=RNU2-18P | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:48511 | ||
|nearest_ensembl=ENSG00000165983 | |nearest_ensembl=ENSG00000165983 | ||
|nearest_promoter_id=NM_030664 | |nearest_promoter_id=NM_030664 | ||
|nearest_refseq=NM_030664 | |nearest_refseq=NM_030664 | ||
|nearest_unigene=Hs.444321 | |nearest_unigene=Hs.444321 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=16476004 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000411224.1 uc057sae.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104011.1 | |tss_id=hg_104011.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:34, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000411224.1 uc057sae.1 |
|---|---|
| Distance: | -2 |
| Num_trans: | 2 |
| All_trans: | ENST00000411224.1:-2 uc057sae.1:-2 |
TATA-Box annotation
| Distance to TSS: | 39062 |
|---|---|
| Nearest PromoterID: | NM_030664 |
| Entrez ID: | 9317 |
| Nearest Unigene: | Hs.444321 |
| Nearest Refseq: | NM_030664 |
| Nearest Ensembl: | ENSG00000165983 |
| Gene Name: | "RNA, U2 small nuclear 18, pseudogene" |
| Gene Alias: | HPHRP |
| Gene Description: | phosphotriesterase related |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.268657 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
