Difference between revisions of "TSS:Hg 104119.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=76 |entrez_id=783 |gc_percent=0.517413 |gene_alias=CACNLB2|CAVB2|MYSB |gene_description=calcium voltage-gated channel auxiliary...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CAVB2= | ||
| + | |MYSB= | ||
| + | |all_trans=ENST00000615785.4:23 ENST00000617363.4:23 ENST00000396576.6:23 uc057sce.1:23 uc057scf.1:23 uc001ipx.3:23 U95019:23 AB208917:23 NM_000724:-62 AK307800:334 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=23 | ||
|distance_to_tss=76 | |distance_to_tss=76 | ||
| + | |end=18260746 | ||
|entrez_id=783 | |entrez_id=783 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
|gene_alias=CACNLB2|CAVB2|MYSB | |gene_alias=CACNLB2|CAVB2|MYSB | ||
|gene_description=calcium voltage-gated channel auxiliary subunit beta 2 | |gene_description=calcium voltage-gated channel auxiliary subunit beta 2 | ||
| − | |gene_name=CACNB2 | + | |gene_id=783 |
| + | |gene_name=calcium voltage-gated channel auxiliary subunit beta 2 | ||
| + | |gene_source=HGNC:1402 | ||
| + | |gene_symbol=CACNB2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1402 | ||
|nearest_ensembl=ENSG00000165995 | |nearest_ensembl=ENSG00000165995 | ||
|nearest_promoter_id=NM_000724 | |nearest_promoter_id=NM_000724 | ||
|nearest_refseq=NM_000724 | |nearest_refseq=NM_000724 | ||
|nearest_unigene=Hs.59093 | |nearest_unigene=Hs.59093 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=18260716 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000615785.4 ENST00000617363.4 ENST00000396576.6 uc057sce.1 uc057scf.1 uc001ipx.3 U95019 AB208917 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104119.1 | |tss_id=hg_104119.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A087WVX5 A0A087WWJ0 Q08289 Q59H42 | ||
}} | }} | ||
Revision as of 20:38, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000615785.4 ENST00000617363.4 ENST00000396576.6 uc057sce.1 uc057scf.1 uc001ipx.3 U95019 AB208917 |
|---|---|
| Distance: | 23 |
| Num_trans: | 10 |
| All_trans: | ENST00000615785.4:23 ENST00000617363.4:23 ENST00000396576.6:23 uc057sce.1:23 uc057scf.1:23 uc001ipx.3:23 U95019:23 AB208917:23 NM_000724:-62 AK307800:334 |
TATA-Box annotation
| Distance to TSS: | 76 |
|---|---|
| Nearest PromoterID: | NM_000724 |
| Entrez ID: | 783 |
| Nearest Unigene: | Hs.59093 |
| Nearest Refseq: | NM_000724 |
| Nearest Ensembl: | ENSG00000165995 |
| Gene Name: | calcium voltage-gated channel auxiliary subunit beta 2 |
| Gene Alias: | CACNLB2 |
| Gene Description: | calcium voltage-gated channel auxiliary subunit beta 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
