Difference between revisions of "TSS:Hg 104136.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=128 |entrez_id=783 |gc_percent=0.323383 |gene_alias=CACNLB2|CAVB2|MYSB |gene_description=calcium voltage-gated channel auxiliary...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CAVB2= | ||
| + | |MYSB= | ||
| + | |all_trans=AK295113:-22 AK299873:-27 ENST00000377315.4:97 uc001iqa.3:97 NM_201570:-125 AK293937:307 AF423192:316 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=-22 | ||
|distance_to_tss=128 | |distance_to_tss=128 | ||
| + | |end=18400716 | ||
|entrez_id=783 | |entrez_id=783 | ||
|gc_percent=0.323383 | |gc_percent=0.323383 | ||
|gene_alias=CACNLB2|CAVB2|MYSB | |gene_alias=CACNLB2|CAVB2|MYSB | ||
|gene_description=calcium voltage-gated channel auxiliary subunit beta 2 | |gene_description=calcium voltage-gated channel auxiliary subunit beta 2 | ||
| − | |gene_name=CACNB2 | + | |gene_id=783 |
| + | |gene_name=calcium voltage-gated channel auxiliary subunit beta 2 | ||
| + | |gene_source=HGNC:1402 | ||
| + | |gene_symbol=CACNB2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1402 | ||
|nearest_ensembl=ENSG00000165995 | |nearest_ensembl=ENSG00000165995 | ||
|nearest_promoter_id=NM_201570 | |nearest_promoter_id=NM_201570 | ||
|nearest_refseq=NM_000724 | |nearest_refseq=NM_000724 | ||
|nearest_unigene=Hs.59093 | |nearest_unigene=Hs.59093 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=18400708 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK295113 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104136.1 | |tss_id=hg_104136.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B7Z2U3 | ||
}} | }} | ||
Revision as of 20:39, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK295113 |
|---|---|
| Distance: | -22 |
| Num_trans: | 7 |
| All_trans: | AK295113:-22 AK299873:-27 ENST00000377315.4:97 uc001iqa.3:97 NM_201570:-125 AK293937:307 AF423192:316 |
TATA-Box annotation
| Distance to TSS: | 128 |
|---|---|
| Nearest PromoterID: | NM_201570 |
| Entrez ID: | 783 |
| Nearest Unigene: | Hs.59093 |
| Nearest Refseq: | NM_000724 |
| Nearest Ensembl: | ENSG00000165995 |
| Gene Name: | calcium voltage-gated channel auxiliary subunit beta 2 |
| Gene Alias: | CACNLB2 |
| Gene Description: | calcium voltage-gated channel auxiliary subunit beta 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.323383 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
