Difference between revisions of "TSS:Hg 104214.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.065 |distance_to_tss=202 |entrez_id=8028 |gc_percent=0.721393 |gene_alias=AF10 |gene_description="myeloid/lymphoid or mixed-lineage leukemia; transl...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000377091.6:-23 uc001iqr.3:-23 ENST00000307729.11:-25 uc001iqt.4:-25 BC065376:-25 BC080577:-25 U13948:-30 AB209755:86 ENST00000471315.5:88 uc057sdv.1:88 BC052798:94 BC094844:97 BC129946:99 ENST00000495130.5:110 uc057sdw.1:110 ENST00000377072.7:-195 uc001iqs.4:-195 NM_001195630:-196 NM_001195628:-196 NM_004641:-196 NM_001195627:-196 ENST00000377100.7:-203 uc001iqq.3:-203 BC032532:-203 ENST00000621220.4:265 ENST00000377059.7:265 NM_001195626:265 uc057sdx.1:265 uc021pny.2:265 CU687346:265 BC156206:265 BC156949:265 AY598745:265 KJ892460:265 ENST00000476557.5:322 uc057sdy.1:322 ENST00000430455.1:369 ENST00000462999.5:369 ENST00000480415.5:369 ENST00000479634.1:369 uc057sdz.1:369 uc009xkf.2:369 uc009xke.2:369 uc001iqx.2:369 AF060927:369 AF060934:369 AF060935:369 AF060936:369 AF060937:369 AF060938:369 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| + | |distance=-23 | ||
|distance_to_tss=202 | |distance_to_tss=202 | ||
| + | |end=21534380 | ||
|entrez_id=8028 | |entrez_id=8028 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
|gene_alias=AF10 | |gene_alias=AF10 | ||
|gene_description="myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10" | |gene_description="myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10" | ||
| − | |gene_name=MLLT10 | + | |gene_id=8028 |
| + | |gene_name="myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10" | ||
| + | |gene_source=HGNC:16063 | ||
| + | |gene_symbol=MLLT10 | ||
| + | |gene_synonyms=AF10 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16063 | ||
|nearest_ensembl=ENSG00000078403 | |nearest_ensembl=ENSG00000078403 | ||
|nearest_promoter_id=NR_136736 | |nearest_promoter_id=NR_136736 | ||
|nearest_refseq=NM_004641 | |nearest_refseq=NM_004641 | ||
|nearest_unigene=Hs.30385 | |nearest_unigene=Hs.30385 | ||
| + | |num_trans=50 | ||
| + | |species=human | ||
| + | |start=21534367 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000377091.6 uc001iqr.3 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104214.1 | |tss_id=hg_104214.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P55197 | ||
}} | }} | ||
Revision as of 20:42, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000377091.6 uc001iqr.3 |
|---|---|
| Distance: | -23 |
| Num_trans: | 50 |
| All_trans: | ENST00000377091.6:-23 uc001iqr.3:-23 ENST00000307729.11:-25 uc001iqt.4:-25 BC065376:-25 BC080577:-25 U13948:-30 AB209755:86 ENST00000471315.5:88 uc057sdv.1:88 BC052798:94 BC094844:97 BC129946:99 ENST00000495130.5:110 uc057sdw.1:110 ENST00000377072.7:-195 uc001iqs.4:-195 NM_001195630:-196 NM_001195628:-196 NM_004641:-196 NM_001195627:-196 ENST00000377100.7:-203 uc001iqq.3:-203 BC032532:-203 ENST00000621220.4:265 ENST00000377059.7:265 NM_001195626:265 uc057sdx.1:265 uc021pny.2:265 CU687346:265 BC156206:265 BC156949:265 AY598745:265 KJ892460:265 ENST00000476557.5:322 uc057sdy.1:322 ENST00000430455.1:369 ENST00000462999.5:369 ENST00000480415.5:369 ENST00000479634.1:369 uc057sdz.1:369 uc009xkf.2:369 uc009xke.2:369 uc001iqx.2:369 AF060927:369 AF060934:369 AF060935:369 AF060936:369 AF060937:369 AF060938:369 |
TATA-Box annotation
| Distance to TSS: | 202 |
|---|---|
| Nearest PromoterID: | NR_136736 |
| Entrez ID: | 8028 |
| Nearest Unigene: | Hs.30385 |
| Nearest Refseq: | NM_004641 |
| Nearest Ensembl: | ENSG00000078403 |
| Gene Name: | "myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10" |
| Gene Alias: | AF10 |
| Gene Description: | "myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10" |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
