Difference between revisions of "TSS:Hg 104253.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.065 |distance_to_tss=-5020 |entrez_id=9576 |gc_percent=0.517413 |gene_alias=CT141|Repro-SA-1|pf16 |gene_description=sperm associated antigen 6 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Repro-SA-1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| + | |distance= | ||
|distance_to_tss=-5020 | |distance_to_tss=-5020 | ||
| + | |end=22340451 | ||
|entrez_id=9576 | |entrez_id=9576 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_012443 | |nearest_refseq=NM_012443 | ||
|nearest_unigene=Hs.655170 | |nearest_unigene=Hs.655170 | ||
| + | |num_trans=0 | ||
| + | |pf16= | ||
| + | |species=human | ||
| + | |start=22340398 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104253.1 | |tss_id=hg_104253.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 20:44, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -5020 |
|---|---|
| Nearest PromoterID: | NM_172242 |
| Entrez ID: | 9576 |
| Nearest Unigene: | Hs.655170 |
| Nearest Refseq: | NM_012443 |
| Nearest Ensembl: | ENSG00000077327 |
| Gene Name: | SPAG6 |
| Gene Alias: | CT141 |
| Gene Description: | sperm associated antigen 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
